RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 PTPN2P17706 415 aa11.66□□□□□ -0.54
SMPD4-213ENST00000454468 POU1F1P28069 291 aa11.66□□□□□ -0.54
SMPD4-213ENST00000454468 SPINT3P49223 89 aa11.66□□□□□ -0.54
SMPD4-213ENST00000454468 LRRC26Q2I0M4 334 aa11.66□□□□□ -0.54
SMPD4-213ENST00000454468 TCEAL5Q5H9L2 206 aa11.66□□□□□ -0.54
SMPD4-213ENST00000454468 TBPL2Q6SJ96 375 aa11.66□□□□□ -0.54
SMPD4-213ENST00000454468 CLECL1Q8IZS7 167 aa11.66□□□□□ -0.54
SMPD4-213ENST00000454468 OR4K1Q8NGD4 311 aa11.66□□□□□ -0.54
SMPD4-213ENST00000454468 IL17FQ96PD4 163 aa11.66□□□□□ -0.54
SMPD4-213ENST00000454468 ACPTQ9BZG2 426 aa11.66□□□□□ -0.54
SMPD4-213ENST00000454468 P2RY12Q9H244 342 aa11.66□□□□□ -0.54
SMPD4-213ENST00000454468 MATN4O95460 622 aa11.66□□□□□ -0.54
SMPD4-213ENST00000454468 ANXA4P09525 319 aaPredicted RBP11.66□□□□□ -0.54
SMPD4-213ENST00000454468 PDHA2P29803 388 aa11.66□□□□□ -0.54
SMPD4-213ENST00000454468 ALDH4A1P30038 563 aa11.66□□□□□ -0.54
SMPD4-213ENST00000454468 POLR2IP36954 125 aaKnown RBP11.66□□□□□ -0.54
SMPD4-213ENST00000454468 DGKGP49619 791 aa11.66□□□□□ -0.54
SMPD4-213ENST00000454468 PDCD4Q53EL6 469 aaKnown RBP11.66□□□□□ -0.54
SMPD4-213ENST00000454468 MMAAQ8IVH4 418 aaKnown RBP11.66□□□□□ -0.54
SMPD4-213ENST00000454468 RBM12BQ8IXT5 1001 aaKnown RBP11.66□□□□□ -0.54
SMPD4-213ENST00000454468 EID3Q8N140 333 aa11.66□□□□□ -0.54
SMPD4-213ENST00000454468 C1orf52Q8N6N3 182 aaKnown RBP11.66□□□□□ -0.54
SMPD4-213ENST00000454468 FATE1Q969F0 183 aa11.66□□□□□ -0.54
SMPD4-213ENST00000454468 ZSWIM3Q96MP5 696 aa11.66□□□□□ -0.54
SMPD4-213ENST00000454468 SH3GL1Q99961 368 aa11.66□□□□□ -0.54
SMPD4-213ENST00000454468 ROGDIQ9GZN7 287 aa11.66□□□□□ -0.54
SMPD4-213ENST00000454468 REXO4Q9GZR2 422 aaKnown RBP11.66□□□□□ -0.54
SMPD4-213ENST00000454468 SPHK2Q9NRA0 654 aa11.66□□□□□ -0.54
SMPD4-213ENST00000454468 DUS2Q9NX74 493 aaKnown RBP11.66□□□□□ -0.54
SMPD4-213ENST00000454468 NDUFA13Q9P0J0 144 aa11.66□□□□□ -0.54
SMPD4-213ENST00000454468 CDC14AQ9UNH5 594 aa11.66□□□□□ -0.54
SMPD4-213ENST00000454468 PCDHA9Q9Y5H5 950 aa11.66□□□□□ -0.54
SMPD4-213ENST00000454468 EPN2O95208 641 aa11.66□□□□□ -0.54
SMPD4-213ENST00000454468 ENO2P09104 434 aaPredicted RBP11.66□□□□□ -0.54
SMPD4-213ENST00000454468 MYOGP15173 224 aa11.66□□□□□ -0.54
SMPD4-213ENST00000454468 RFC2P35250 354 aa11.66□□□□□ -0.54
SMPD4-213ENST00000454468 IRS1P35568 1242 aa11.66□□□□□ -0.54
SMPD4-213ENST00000454468 CCDC92Q53HC0 331 aaPredicted RBP11.66□□□□□ -0.54
SMPD4-213ENST00000454468 FRG2Q64ET8 278 aa11.66□□□□□ -0.54
SMPD4-213ENST00000454468 CES5AQ6NT32 575 aa11.66□□□□□ -0.54
SMPD4-213ENST00000454468 RD3Q7Z3Z2 195 aa11.66□□□□□ -0.54
SMPD4-213ENST00000454468 APLFQ8IW19 511 aaPredicted RBP11.66□□□□□ -0.54
SMPD4-213ENST00000454468 SMG7Q92540 1137 aaKnown RBP11.66□□□□□ -0.54
SMPD4-213ENST00000454468 FRG2BQ96QU4 278 aa11.66□□□□□ -0.54
SMPD4-213ENST00000454468 OR51B5Q9H339 312 aa11.66□□□□□ -0.54
SMPD4-213ENST00000454468 ZNF451Q9Y4E5 1061 aa11.66□□□□□ -0.54
SMPD4-213ENST00000454468 PCDHB14Q9Y5E9 798 aa11.66□□□□□ -0.54
SMPD4-213ENST00000454468 C16orf96A6NNT2 1141 aa11.65□□□□□ -0.54
SMPD4-213ENST00000454468 TRMUO75648 421 aaKnown RBP11.65□□□□□ -0.54
SMPD4-213ENST00000454468 PABPC4LP0CB38 370 aaKnown RBP11.65□□□□□ -0.54
SMPD4-213ENST00000454468 HSD17B1P14061 328 aa11.65□□□□□ -0.54
SMPD4-213ENST00000454468 GALK1P51570 392 aa11.65□□□□□ -0.54
SMPD4-213ENST00000454468 METAP1P53582 386 aa11.65□□□□□ -0.54
SMPD4-213ENST00000454468 EEFSECP57772 596 aaKnown RBP11.65□□□□□ -0.54
SMPD4-213ENST00000454468 MEP1AQ16819 746 aa11.65□□□□□ -0.54
SMPD4-213ENST00000454468 UAP1L1Q3KQV9 507 aa11.65□□□□□ -0.54
SMPD4-213ENST00000454468 LYPLAL1Q5VWZ2 237 aa11.65□□□□□ -0.54
SMPD4-213ENST00000454468 PDE12Q6L8Q7 609 aaKnown RBP11.65□□□□□ -0.54
SMPD4-213ENST00000454468 PROSER1Q86XN7 944 aa11.65□□□□□ -0.54
SMPD4-213ENST00000454468 ZC3H7AQ8IWR0 971 aaKnown RBP11.65□□□□□ -0.54
SMPD4-213ENST00000454468 TRMT2BQ96GJ1 504 aaKnown RBP11.65□□□□□ -0.54
SMPD4-213ENST00000454468 PTBP2Q9UKA9 531 aaKnown RBP11.65□□□□□ -0.54
SMPD4-213ENST00000454468 RIMKLBQ9ULI2 386 aa11.65□□□□□ -0.54
SMPD4-213ENST00000454468 BPTFQ12830 3046 aa11.65□□□□□ -0.54
SMPD4-213ENST00000454468 AGRPO00253 132 aa11.65□□□□□ -0.54
SMPD4-213ENST00000454468 LATO43561 262 aa11.65□□□□□ -0.54
SMPD4-213ENST00000454468 SOCS5O75159 536 aa11.65□□□□□ -0.54
SMPD4-213ENST00000454468 PENKP01210 267 aaPredicted RBP11.65□□□□□ -0.54
SMPD4-213ENST00000454468 SMIM18P0DKX4 95 aa11.65□□□□□ -0.54
SMPD4-213ENST00000454468 THRBP10828 461 aa11.65□□□□□ -0.54
SMPD4-213ENST00000454468 POU2F1P14859 743 aa11.65□□□□□ -0.54
SMPD4-213ENST00000454468 TMEM26Q6ZUK4 368 aa11.65□□□□□ -0.54
SMPD4-213ENST00000454468 KCTD8Q6ZWB6 473 aa11.65□□□□□ -0.54
SMPD4-213ENST00000454468 GET4Q7L5D6 327 aaPredicted RBP11.65□□□□□ -0.54
SMPD4-213ENST00000454468 MAL2Q969L2 176 aa11.65□□□□□ -0.54
SMPD4-213ENST00000454468 PAIP1Q9H074 479 aaKnown RBP11.65□□□□□ -0.54
SMPD4-213ENST00000454468 CXorf21Q9HAI6 301 aa11.65□□□□□ -0.54
SMPD4-213ENST00000454468 VWA8A3KMH1 1905 aa11.65□□□□□ -0.55
SMPD4-213ENST00000454468 CDH23Q9H251 3354 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 E7EQ34 232 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 SLC16A8O95907 504 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 EPHX1P07099 455 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 C1SP09871 688 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 PCSK6P29122 969 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 PCBP2Q15366 365 aaKnown RBP eCLIP11.64□□□□□ -0.553e-6■■■■□ 25.6
SMPD4-213ENST00000454468 PYCR3Q53H96 274 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 OGFOD2Q6N063 350 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 PPP4R4Q6NUP7 873 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 NEK5Q6P3R8 708 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 AGTRAPQ6RW13 159 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 VTCN1Q7Z7D3 282 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 EPHX4Q8IUS5 362 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 C8orf59Q8N0T1 100 aaPredicted RBP11.64□□□□□ -0.55
SMPD4-213ENST00000454468 VPS37AQ8NEZ2 397 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 FRS2Q8WU20 508 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 BADQ92934 168 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 ZUFSPQ96AP4 578 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 FANCEQ9HB96 536 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 ZNF510Q9Y2H8 683 aa11.64□□□□□ -0.55
SMPD4-213ENST00000454468 OR51B4Q9Y5P0 310 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms