RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 PRDM5Q9NQX1 630 aaPredicted RBP6.44□□□□□ -1.38
VPS13B-202ENST00000357162 SLC12A8A0AV02 714 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 RPL7AP62424 266 aaKnown RBP6.44□□□□□ -1.38
VPS13B-202ENST00000357162 SENP2Q9HC62 589 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 IL17RBQ9NRM6 502 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 MGAT4BQ9UQ53 548 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 HTRA2O43464 458 aaPredicted RBP6.44□□□□□ -1.38
VPS13B-202ENST00000357162 ATG12O94817 140 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 MMP12P39900 470 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 EIF2S3P41091 472 aaKnown RBP6.44□□□□□ -1.38
VPS13B-202ENST00000357162 MAZP56270 477 aaKnown RBP6.44□□□□□ -1.38
VPS13B-202ENST00000357162 EMX2Q04743 252 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 BTG3Q14201 252 aaPredicted RBP6.44□□□□□ -1.38
VPS13B-202ENST00000357162 DICER1Q9UPY3 1922 aaKnown RBP6.44□□□□□ -1.38
VPS13B-202ENST00000357162 TSTD3H0UI37 97 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 MARCKSL1P49006 195 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 HECTD2Q5U5R9 776 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 TMCO2Q7Z6W1 182 aaPredicted RBP6.44□□□□□ -1.38
VPS13B-202ENST00000357162 SYVN1Q86TM6 617 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 OR5J2Q8NH18 312 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 SETD7Q8WTS6 366 aaKnown RBP6.44□□□□□ -1.38
VPS13B-202ENST00000357162 RERGQ96A58 199 aaPredicted RBP6.44□□□□□ -1.38
VPS13B-202ENST00000357162 OR51E2Q9H255 320 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 CCSER2Q9H7U1 834 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 SRRDQ9UH36 339 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 UBR1Q8IWV7 1749 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 MEGF11A6BM72 1044 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 DISC1C4P0D8 188 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 STXBP1P61764 594 aaKnown RBP6.44□□□□□ -1.38
VPS13B-202ENST00000357162 ARL11Q969Q4 196 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 SLC22A18Q96BI1 424 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 GLT1D1Q96MS3 346 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 TBCDQ9BTW9 1192 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 IRF2BPLQ9H1B7 796 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 CPVLQ9H3G5 476 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 RNASEH2AO75792 299 aaKnown RBP6.44□□□□□ -1.38
VPS13B-202ENST00000357162 PTPN1P18031 435 aaKnown RBP6.44□□□□□ -1.38
VPS13B-202ENST00000357162 GTF2H2Q13888 395 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 GTF2H2CQ6P1K8 395 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 BRINP3Q76B58 766 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.44□□□□□ -1.38
VPS13B-202ENST00000357162 OR4C15Q8NGM1 316 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 ERVK-5Q9HDB9 667 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 SAGE1Q9NXZ1 904 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 FKBPLQ9UIM3 349 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 ZNF780BQ9Y6R6 833 aa6.44□□□□□ -1.38
VPS13B-202ENST00000357162 CREBL2O60519 120 aaPredicted RBP6.43□□□□□ -1.38
VPS13B-202ENST00000357162 LAMP2P13473 410 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 PKMP14618 531 aaKnown RBP6.43□□□□□ -1.38
VPS13B-202ENST00000357162 HTR1BP28222 390 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 ATP5C1P36542 298 aaKnown RBP6.43□□□□□ -1.38
VPS13B-202ENST00000357162 ZNF782Q6ZMW2 699 aaPredicted RBP6.43□□□□□ -1.38
VPS13B-202ENST00000357162 KLHDC8BQ8IXV7 354 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 KIAA1191Q96A73 305 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 NXPE2Q96DL1 559 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 TKTL2Q9H0I9 626 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 ZNF334Q9HCZ1 680 aaPredicted RBP6.43□□□□□ -1.38
VPS13B-202ENST00000357162 LCN8Q6JVE9 175 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 ZNF783Q6ZMS7 281 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 SLC15A3Q8IY34 581 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 NDUFAF4Q9P032 175 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 LIPT1Q9Y234 373 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 MAGEA3P43357 314 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 CMTR2Q8IYT2 770 aaKnown RBP6.43□□□□□ -1.38
VPS13B-202ENST00000357162 SLC41A3Q96GZ6 507 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 TCF25Q9BQ70 676 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 TPK1Q9H3S4 243 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 COQ10BQ9H8M1 238 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 UGDHO60701 494 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 LRCH4O75427 683 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 GKN3PP0CG01 181 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 RPL10P27635 214 aaKnown RBP6.43□□□□□ -1.38
VPS13B-202ENST00000357162 NUDT1P36639 197 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 GRIK4Q16099 956 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 FAM183BPQ6ZVS7 135 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 DET1Q7L5Y6 550 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 SLC7A5P2Q9GIP4 190 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 RPF2Q9H7B2 306 aaKnown RBP6.43□□□□□ -1.38
VPS13B-202ENST00000357162 IFT46Q9NQC8 304 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 KMOO15229 486 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 RHCEP18577 417 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 SUOXP51687 545 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 XKR6Q5GH73 641 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 SLC43A2Q8N370 569 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 UBA3Q8TBC4 463 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 LINGO1Q96FE5 620 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 FCRL5Q96RD9 977 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 NPAS2Q99743 824 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 OR10H1Q9Y4A9 318 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 SLC15A5A6NIM6 579 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 DCLK1O15075 740 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 NARSO43776 548 aaKnown RBP6.43□□□□□ -1.38
VPS13B-202ENST00000357162 CRYZL1O95825 349 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 MTHFD1P11586 935 aaKnown RBP6.43□□□□□ -1.38
VPS13B-202ENST00000357162 EPORP19235 508 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 CLCN4P51793 760 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 XKP51811 444 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 RAP2BP61225 183 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 LPCAT4Q643R3 524 aa6.43□□□□□ -1.38
VPS13B-202ENST00000357162 KLHL5Q96PQ7 755 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms