RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 LGR4Q9BXB1 951 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 TBCCD1Q9NVR7 557 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 ENPP3O14638 875 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 PIGRP01833 764 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 LINGO3P0C6S8 592 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 FPR1P21462 350 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 ADGRG6Q86SQ4 1221 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 CCDC107Q8WV48 283 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 ZNF599Q96NL3 588 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.53□□□□□ -0.083e-9■□□□□ 9.2
CHD4-201ENST00000357008 PCDHGB1Q9Y5G3 927 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 IRAK2O43187 625 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 FAM189A1O60320 539 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 PRLP01236 227 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 DBIP07108 87 aaKnown RBP14.53□□□□□ -0.08
CHD4-201ENST00000357008 KCNA5P22460 613 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 PRKCHP24723 683 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 NRLP54845 237 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 SOWAHAQ2M3V2 549 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 SYCE2Q6PIF2 218 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 TMEM110Q86TL2 294 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 SPAG16Q8N0X2 631 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 OR2L5Q8NG80 312 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 RBM18Q96H35 190 aaKnown RBP14.53□□□□□ -0.08
CHD4-201ENST00000357008 STOX2Q9P2F5 926 aaPredicted RBP14.53□□□□□ -0.08
CHD4-201ENST00000357008 FBXL21Q9UKT6 434 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 PCDHGA3Q9Y5H0 932 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 OR51F1A6NGY5 319 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 ARL5CA6NH57 179 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 HLA-DQB2P05538 268 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 IL4I1Q96RQ9 567 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 PTPN18Q99952 460 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 MAPKAP1Q9BPZ7 522 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 MND1Q9BWT6 205 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 FAM53CQ9NYF3 392 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 ZNF639Q9UID6 485 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 MEMO1Q9Y316 297 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 NFAT5O94916 1531 aa14.53□□□□□ -0.08
CHD4-201ENST00000357008 DDX6P26196 483 aaKnown RBP eCLIP14.52□□□□□ -0.082e-10■■■■■ 32.8
CHD4-201ENST00000357008 TSC22D1Q15714 1073 aa14.52□□□□□ -0.08
CHD4-201ENST00000357008 UBXN11Q5T124 520 aa14.52□□□□□ -0.08
CHD4-201ENST00000357008 TOMM5Q8N4H5 51 aa14.52□□□□□ -0.08
CHD4-201ENST00000357008 OSBPL2Q9H1P3 480 aa14.52□□□□□ -0.08
CHD4-201ENST00000357008 NIPSNAP2O75323 286 aa14.52□□□□□ -0.08
CHD4-201ENST00000357008 SPATA31D3P0C874 917 aa14.52□□□□□ -0.08
CHD4-201ENST00000357008 IFI30P13284 250 aa14.52□□□□□ -0.08
CHD4-201ENST00000357008 SPATA31D4Q6ZUB0 917 aa14.52□□□□□ -0.08
CHD4-201ENST00000357008 MARCH9Q86YJ5 346 aa14.52□□□□□ -0.08
CHD4-201ENST00000357008 RELL1Q8IUW5 271 aa14.52□□□□□ -0.08
CHD4-201ENST00000357008 COX18Q8N8Q8 333 aa14.52□□□□□ -0.08
CHD4-201ENST00000357008 C15orf40Q8WUR7 153 aa14.52□□□□□ -0.08
CHD4-201ENST00000357008 BIRC7Q96CA5 298 aa14.52□□□□□ -0.08
CHD4-201ENST00000357008 COL21A1Q96P44 957 aa14.52□□□□□ -0.08
CHD4-201ENST00000357008 WRAP53Q9BUR4 548 aaKnown RBP14.52□□□□□ -0.08
CHD4-201ENST00000357008 USP29Q9HBJ7 922 aa14.52□□□□□ -0.08
CHD4-201ENST00000357008 UCKL1Q9NWZ5 548 aa14.52□□□□□ -0.08
CHD4-201ENST00000357008 AHSGP02765 367 aa14.52□□□□□ -0.08
CHD4-201ENST00000357008 LAG3P18627 525 aa14.52□□□□□ -0.08
CHD4-201ENST00000357008 RBM34P42696 430 aaKnown RBP14.52□□□□□ -0.08
CHD4-201ENST00000357008 CD83Q01151 205 aa14.52□□□□□ -0.08
CHD4-201ENST00000357008 MAB21L1Q13394 359 aa14.52□□□□□ -0.08
CHD4-201ENST00000357008 MSS51Q4VC12 460 aa14.52□□□□□ -0.08
CHD4-201ENST00000357008 ASB18Q6ZVZ8 466 aa14.52□□□□□ -0.08
CHD4-201ENST00000357008 FAM110BQ8TC76 370 aa14.52□□□□□ -0.08
CHD4-201ENST00000357008 SLC22A17Q8WUG5 538 aa14.52□□□□□ -0.08
CHD4-201ENST00000357008 CDKN2AIPNLQ96HQ2 116 aa14.52□□□□□ -0.08
CHD4-201ENST00000357008 C14orf105Q9NVL8 296 aa14.52□□□□□ -0.08
CHD4-201ENST00000357008 MED31Q9Y3C7 131 aa14.52□□□□□ -0.08
CHD4-201ENST00000357008 DUXAA6NLW8 204 aa14.52□□□□□ -0.09
CHD4-201ENST00000357008 ENTPD6O75354 484 aa14.52□□□□□ -0.09
CHD4-201ENST00000357008 RLN2P04090 185 aa14.52□□□□□ -0.09
CHD4-201ENST00000357008 DGKQP52824 942 aa14.52□□□□□ -0.09
CHD4-201ENST00000357008 DSTNP60981 165 aa14.52□□□□□ -0.09
CHD4-201ENST00000357008 KIAA1161Q6NSJ0 714 aa14.52□□□□□ -0.09
CHD4-201ENST00000357008 SLC2A7Q6PXP3 512 aa14.52□□□□□ -0.09
CHD4-201ENST00000357008 XKR5Q6UX68 686 aa14.52□□□□□ -0.09
CHD4-201ENST00000357008 LINC00471Q8N535 108 aa14.52□□□□□ -0.09
CHD4-201ENST00000357008 SLC35A5Q9BS91 424 aa14.52□□□□□ -0.09
CHD4-201ENST00000357008 RPF2Q9H7B2 306 aaKnown RBP14.52□□□□□ -0.09
CHD4-201ENST00000357008 TLR6Q9Y2C9 796 aa14.52□□□□□ -0.09
CHD4-201ENST00000357008 NPPAP01160 153 aa14.52□□□□□ -0.09
CHD4-201ENST00000357008 ECHS1P30084 290 aa14.52□□□□□ -0.09
CHD4-201ENST00000357008 MBOAT1Q6ZNC8 495 aa14.52□□□□□ -0.09
CHD4-201ENST00000357008 ZUFSPQ96AP4 578 aa14.52□□□□□ -0.09
CHD4-201ENST00000357008 PYURFQ96I23 114 aa14.52□□□□□ -0.09
CHD4-201ENST00000357008 TUBA1CQ9BQE3 449 aa14.52□□□□□ -0.09
CHD4-201ENST00000357008 EFCAB11Q9BUY7 163 aa14.52□□□□□ -0.09
CHD4-201ENST00000357008 MIR1-1HGQ9H1L0 117 aa14.52□□□□□ -0.09
CHD4-201ENST00000357008 DCLK1O15075 740 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 PRH1P02810 166 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 ACVR2AP27037 513 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 PLA2G16P53816 162 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 SYPL2Q5VXT5 272 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 PLCZ1Q86YW0 608 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 C1orf216Q8TAB5 229 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 TAPBPLQ9BX59 468 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 SLC29A3Q9BZD2 475 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 SLC32A1Q9H598 525 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 FNIP2Q9P278 1114 aa14.51□□□□□ -0.09
CHD4-201ENST00000357008 A0A0G2JPF8 293 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms