RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 TUBGCP3Q96CW5 907 aa16.52■□□□□ 0.24
CDKN1A-201ENST00000244741 SLC6A18Q96N87 628 aa16.52■□□□□ 0.24
CDKN1A-201ENST00000244741 POLG2Q9UHN1 485 aa16.52■□□□□ 0.24
CDKN1A-201ENST00000244741 THADAQ6YHU6 1953 aa16.52■□□□□ 0.23
CDKN1A-201ENST00000244741 IGLV3-16A0A075B6K0 115 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 TCRBV3S1A0A5B6 114 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 NCF1BA6NI72 391 aaPredicted RBP16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 METTL12A8MUP2 240 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 NCF1CA8MVU1 366 aaPredicted RBP16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 E5RI56 91 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 NCF1P14598 390 aaPredicted RBP16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 AKT2P31751 481 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 CCR5P51681 352 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 GK3PQ14409 553 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 C6orf52Q5T4I8 152 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 ANKS6Q68DC2 871 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 TMEM220Q6QAJ8 160 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 ISLR2Q6UXK2 745 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 NLRP8Q86W28 1048 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 TRAPPC5Q8IUR0 188 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 MIER2Q8N344 545 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 SPDYE1Q8NFV5 336 aaPredicted RBP16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 LRTOMTQ8WZ04 291 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 FOXJ1Q92949 421 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 ROPN1LQ96C74 230 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 SLC45A3Q96JT2 553 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 ORAI3Q9BRQ5 295 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 GPATCH1Q9BRR8 931 aaKnown RBP16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 TEX101Q9BY14 249 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 SEMA6AQ9H2E6 1030 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 Q9H521 79 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 IL1RL2Q9HB29 575 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 PAPOLBQ9NRJ5 636 aaKnown RBP16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 AASDHPPTQ9NRN7 309 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 TM7SF3Q9NS93 570 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 VPS9D1Q9Y2B5 631 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 TIMM22Q9Y584 194 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 A0A1W2PPC4 97 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 C10orf142B7Z368 130 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 BTN3A1O00481 513 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 SGTAO43765 313 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 TSPAN12O95859 305 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 ESR1P03372 595 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 FUCA1P04066 466 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 HGFP14210 728 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 ZNF26P17031 533 aaPredicted RBP16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 CAPN3P20807 821 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 PRDX3P30048 256 aaKnown RBP16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 POLE2P56282 527 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 RGL4Q8IZJ4 473 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 PCYOX1LQ8NBM8 494 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 TMEM145Q8NBT3 493 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 OR13H1Q8NG92 308 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 ZNF483Q8TF39 744 aaPredicted RBP16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 COX14Q96I36 57 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 CENPKQ9BS16 269 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 TRIM39Q9HCM9 518 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 KCTD5Q9NXV2 234 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 GNPTGQ9UJJ9 305 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 CEP192Q8TEP8 1941 aa16.51■□□□□ 0.23
CDKN1A-201ENST00000244741 BBIP1A8MTZ0 92 aa16.5■□□□□ 0.23
CDKN1A-201ENST00000244741 CFAP99D6REC4 459 aa16.5■□□□□ 0.23
CDKN1A-201ENST00000244741 RPS17P08708 135 aaKnown RBP16.5■□□□□ 0.23
CDKN1A-201ENST00000244741 SMIM18P0DKX4 95 aa16.5■□□□□ 0.23
CDKN1A-201ENST00000244741 LBPP18428 481 aa16.5■□□□□ 0.23
CDKN1A-201ENST00000244741 Q6ZSR6 202 aa16.5■□□□□ 0.23
CDKN1A-201ENST00000244741 RD3Q7Z3Z2 195 aa16.5■□□□□ 0.23
CDKN1A-201ENST00000244741 NKAPQ8N5F7 415 aaKnown RBP16.5■□□□□ 0.23
CDKN1A-201ENST00000244741 CNBD2Q96M20 576 aa16.5■□□□□ 0.23
CDKN1A-201ENST00000244741 PHPT1Q9NRX4 125 aaPredicted RBP16.5■□□□□ 0.23
CDKN1A-201ENST00000244741 PRAMEF26H0Y7S4 382 aa16.5■□□□□ 0.23
CDKN1A-201ENST00000244741 HRO43593 1189 aa16.5■□□□□ 0.23
CDKN1A-201ENST00000244741 PYGLP06737 847 aa16.5■□□□□ 0.23
CDKN1A-201ENST00000244741 YBX1P67809 324 aaKnown RBP16.5■□□□□ 0.23
CDKN1A-201ENST00000244741 CNPY1Q3B7I2 92 aa16.5■□□□□ 0.23
CDKN1A-201ENST00000244741 SLC30A9Q6PML9 568 aa16.5■□□□□ 0.23
CDKN1A-201ENST00000244741 LILRA3Q8N6C8 439 aaPredicted RBP16.5■□□□□ 0.23
CDKN1A-201ENST00000244741 EEF1AKMT1Q8WVE0 214 aa16.5■□□□□ 0.23
CDKN1A-201ENST00000244741 DUS3LQ96G46 650 aaKnown RBP16.5■□□□□ 0.23
CDKN1A-201ENST00000244741 COQ10BQ9H8M1 238 aa16.5■□□□□ 0.23
CDKN1A-201ENST00000244741 SDR39U1Q9NRG7 319 aaPredicted RBP16.5■□□□□ 0.23
CDKN1A-201ENST00000244741 ZNHIT2Q9UHR6 403 aa16.5■□□□□ 0.23
CDKN1A-201ENST00000244741 ZNF225Q9UK10 706 aa16.5■□□□□ 0.23
CDKN1A-201ENST00000244741 NDUFAF1Q9Y375 327 aa16.5■□□□□ 0.23
CDKN1A-201ENST00000244741 SPAG17Q6Q759 2223 aa16.49■□□□□ 0.23
CDKN1A-201ENST00000244741 SPEGQ15772 3267 aa16.49■□□□□ 0.23
CDKN1A-201ENST00000244741 SYCE1LA8MT33 242 aa16.49■□□□□ 0.23
CDKN1A-201ENST00000244741 NME4O00746 187 aa16.49■□□□□ 0.23
CDKN1A-201ENST00000244741 KLK8O60259 260 aa16.49■□□□□ 0.23
CDKN1A-201ENST00000244741 VPS26AO75436 327 aa16.49■□□□□ 0.23
CDKN1A-201ENST00000244741 MYCLP1P12525 358 aaPredicted RBP16.49■□□□□ 0.23
CDKN1A-201ENST00000244741 SLC7A1P30825 629 aa16.49■□□□□ 0.23
CDKN1A-201ENST00000244741 HOXA6P31267 233 aa16.49■□□□□ 0.23
CDKN1A-201ENST00000244741 HK3P52790 923 aa16.49■□□□□ 0.23
CDKN1A-201ENST00000244741 DIO3P55073 304 aa16.49■□□□□ 0.23
CDKN1A-201ENST00000244741 ADARP55265 1226 aaKnown RBP16.49■□□□□ 0.23
CDKN1A-201ENST00000244741 ZNF542PQ5EBM4 170 aa16.49■□□□□ 0.23
CDKN1A-201ENST00000244741 UGT3A1Q6NUS8 523 aa16.49■□□□□ 0.23
CDKN1A-201ENST00000244741 BMP8AQ7Z5Y6 402 aa16.49■□□□□ 0.23
CDKN1A-201ENST00000244741 SYVN1Q86TM6 617 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms