RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 USP7Q93009 1102 aa14.72□□□□□ -0.05
TRIM3-215ENST00000639856 ZNF696Q9H7X3 374 aa14.72□□□□□ -0.05
TRIM3-215ENST00000639856 SMOXQ9NWM0 555 aa14.72□□□□□ -0.05
TRIM3-215ENST00000639856 THAP10Q9P2Z0 257 aaPredicted RBP14.72□□□□□ -0.05
TRIM3-215ENST00000639856 F5P12259 2224 aa14.71□□□□□ -0.05
TRIM3-215ENST00000639856 TCRBV5S2A0A599 114 aa14.71□□□□□ -0.05
TRIM3-215ENST00000639856 NUAK1O60285 661 aa14.71□□□□□ -0.05
TRIM3-215ENST00000639856 CLDN9O95484 217 aa14.71□□□□□ -0.05
TRIM3-215ENST00000639856 PABPC4LP0CB38 370 aaKnown RBP14.71□□□□□ -0.05
TRIM3-215ENST00000639856 ATP1B2P14415 290 aaPredicted RBP14.71□□□□□ -0.05
TRIM3-215ENST00000639856 FASP25445 335 aa14.71□□□□□ -0.05
TRIM3-215ENST00000639856 NFKBIAP25963 317 aa14.71□□□□□ -0.05
TRIM3-215ENST00000639856 WASP42768 502 aa14.71□□□□□ -0.05
TRIM3-215ENST00000639856 GNPDA1P46926 289 aa14.71□□□□□ -0.05
TRIM3-215ENST00000639856 TXNL4AP83876 142 aaKnown RBP14.71□□□□□ -0.05
TRIM3-215ENST00000639856 HMGCS1Q01581 520 aa14.71□□□□□ -0.05
TRIM3-215ENST00000639856 HSPA14Q0VDF9 509 aa14.71□□□□□ -0.05
TRIM3-215ENST00000639856 KIAA0040Q15053 153 aa14.71□□□□□ -0.05
TRIM3-215ENST00000639856 INTS11Q5TA45 600 aaKnown RBP14.71□□□□□ -0.05
TRIM3-215ENST00000639856 UBE2R2Q712K3 238 aaPredicted RBP14.71□□□□□ -0.05
TRIM3-215ENST00000639856 TRAM1L1Q8N609 369 aa14.71□□□□□ -0.05
TRIM3-215ENST00000639856 BEND7Q8N7W2 519 aaPredicted RBP14.71□□□□□ -0.05
TRIM3-215ENST00000639856 TRPV3Q8NET8 790 aa14.71□□□□□ -0.05
TRIM3-215ENST00000639856 SUSD6Q92537 303 aa14.71□□□□□ -0.05
TRIM3-215ENST00000639856 SLC12A9Q9BXP2 914 aa14.71□□□□□ -0.05
TRIM3-215ENST00000639856 SLC29A3Q9BZD2 475 aa14.71□□□□□ -0.05
TRIM3-215ENST00000639856 ZNF576Q9H609 170 aa14.71□□□□□ -0.05
TRIM3-215ENST00000639856 PARVBQ9HBI1 364 aa14.71□□□□□ -0.05
TRIM3-215ENST00000639856 PRSS16Q9NQE7 514 aa14.71□□□□□ -0.05
TRIM3-215ENST00000639856 KANSL1LA0AUZ9 987 aa14.71□□□□□ -0.06
TRIM3-215ENST00000639856 MANBAO00462 879 aa14.71□□□□□ -0.06
TRIM3-215ENST00000639856 C8GP07360 202 aa14.71□□□□□ -0.06
TRIM3-215ENST00000639856 UMPSP11172 480 aa14.71□□□□□ -0.06
TRIM3-215ENST00000639856 ADRB3P13945 408 aa14.71□□□□□ -0.06
TRIM3-215ENST00000639856 NCK1P16333 377 aa14.71□□□□□ -0.06
TRIM3-215ENST00000639856 EPORP19235 508 aa14.71□□□□□ -0.06
TRIM3-215ENST00000639856 LTBRP36941 435 aa14.71□□□□□ -0.06
TRIM3-215ENST00000639856 DGKQP52824 942 aa14.71□□□□□ -0.06
TRIM3-215ENST00000639856 PWP1Q13610 501 aa14.71□□□□□ -0.06
TRIM3-215ENST00000639856 IMPG1Q17R60 797 aa14.71□□□□□ -0.06
TRIM3-215ENST00000639856 AAK1Q2M2I8 961 aa14.71□□□□□ -0.06
TRIM3-215ENST00000639856 PROSER1Q86XN7 944 aa14.71□□□□□ -0.06
TRIM3-215ENST00000639856 GALNT13Q8IUC8 556 aa14.71□□□□□ -0.06
TRIM3-215ENST00000639856 RGL4Q8IZJ4 473 aa14.71□□□□□ -0.06
TRIM3-215ENST00000639856 TCAIMQ8N3R3 496 aa14.71□□□□□ -0.06
TRIM3-215ENST00000639856 ASB11Q8WXH4 323 aa14.71□□□□□ -0.06
TRIM3-215ENST00000639856 AP2M1Q96CW1 435 aa14.71□□□□□ -0.06
TRIM3-215ENST00000639856 PPM1MQ96MI6 270 aa14.71□□□□□ -0.06
TRIM3-215ENST00000639856 ZBTB18Q99592 522 aa14.71□□□□□ -0.06
TRIM3-215ENST00000639856 CGREF1Q99674 301 aa14.71□□□□□ -0.06
TRIM3-215ENST00000639856 TRMT61BQ9BVS5 477 aaKnown RBP14.71□□□□□ -0.06
TRIM3-215ENST00000639856 OR2AG2A6NM03 316 aa14.7□□□□□ -0.06
TRIM3-215ENST00000639856 SOCS2O14508 198 aa14.7□□□□□ -0.06
TRIM3-215ENST00000639856 SGTAO43765 313 aa14.7□□□□□ -0.06
TRIM3-215ENST00000639856 MPC1LP0DKB6 136 aa14.7□□□□□ -0.06
TRIM3-215ENST00000639856 FCGR1AP12314 374 aa14.7□□□□□ -0.06
TRIM3-215ENST00000639856 PTGR1Q14914 329 aa14.7□□□□□ -0.06
TRIM3-215ENST00000639856 ZNF284Q2VY69 593 aa14.7□□□□□ -0.06
TRIM3-215ENST00000639856 ITPRIPL2Q3MIP1 535 aa14.7□□□□□ -0.06
TRIM3-215ENST00000639856 PLEKHS1Q5SXH7 462 aa14.7□□□□□ -0.06
TRIM3-215ENST00000639856 LRRC70Q7Z2Q7 622 aa14.7□□□□□ -0.06
TRIM3-215ENST00000639856 VRK3Q8IV63 474 aa14.7□□□□□ -0.06
TRIM3-215ENST00000639856 PACRGLQ8N7B6 248 aa14.7□□□□□ -0.06
TRIM3-215ENST00000639856 PAPD5Q8NDF8 572 aaKnown RBP14.7□□□□□ -0.06
TRIM3-215ENST00000639856 NUDT8Q8WV74 236 aa14.7□□□□□ -0.06
TRIM3-215ENST00000639856 ZSCAN5AQ9BUG6 496 aa14.7□□□□□ -0.06
TRIM3-215ENST00000639856 ACTR8Q9H981 624 aa14.7□□□□□ -0.06
TRIM3-215ENST00000639856 LRTM1Q9HBL6 345 aa14.7□□□□□ -0.06
TRIM3-215ENST00000639856 ASIC5Q9NY37 505 aa14.7□□□□□ -0.06
TRIM3-215ENST00000639856 NFKBIL1Q9UBC1 381 aaPredicted RBP14.7□□□□□ -0.06
TRIM3-215ENST00000639856 WNT9AO14904 365 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 AREL1O15033 823 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 TPST1O60507 370 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 SEC22BO75396 215 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 PGM3O95394 542 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 CLPTM1O96005 669 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 KRT6AP02538 564 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 KRT6BP04259 564 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 FESP07332 822 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 HIST1H2AGP0C0S8 130 aaPredicted RBP14.69□□□□□ -0.06
TRIM3-215ENST00000639856 HIST1H2ADP20671 130 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 KRT6CP48668 564 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 HNMTP50135 292 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 BOP1Q14137 746 aaKnown RBP14.69□□□□□ -0.06
TRIM3-215ENST00000639856 ZXDCQ2QGD7 858 aaPredicted RBP14.69□□□□□ -0.06
TRIM3-215ENST00000639856 SGO1Q5FBB7 561 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 CACHD1Q5VU97 1274 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 IYDQ6PHW0 289 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 ISLR2Q6UXK2 745 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 CARM1Q86X55 608 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 GLB1L3Q8NCI6 653 aaPredicted RBP14.69□□□□□ -0.06
TRIM3-215ENST00000639856 DDHD1Q8NEL9 900 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 SKA2Q8WVK7 121 aaPredicted RBP14.69□□□□□ -0.06
TRIM3-215ENST00000639856 SLC13A3Q8WWT9 602 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 CENPNQ96H22 339 aaPredicted RBP14.69□□□□□ -0.06
TRIM3-215ENST00000639856 HIST1H2AHQ96KK5 128 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 COQ10AQ96MF6 247 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 RIPOR3Q96MK2 946 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 HIST1H2AJQ99878 128 aa14.69□□□□□ -0.06
TRIM3-215ENST00000639856 H2AFJQ9BTM1 129 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms