RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 TMEM207Q6UWW9 146 aa17.78■□□□□ 0.44
TPM1-226ENST00000560959 GFRALQ6UXV0 394 aa17.78■□□□□ 0.44
TPM1-226ENST00000560959 LINC00696Q6ZRV3 163 aa17.78■□□□□ 0.44
TPM1-226ENST00000560959 COX15Q7KZN9 410 aa17.78■□□□□ 0.44
TPM1-226ENST00000560959 DNAJB8Q8NHS0 232 aa17.78■□□□□ 0.44
TPM1-226ENST00000560959 QKIQ96PU8 341 aaKnown RBP eCLIP17.78■□□□□ 0.44
TPM1-226ENST00000560959 TAAR6Q96RI8 345 aa17.78■□□□□ 0.44
TPM1-226ENST00000560959 GORASP1Q9BQQ3 440 aa17.78■□□□□ 0.44
TPM1-226ENST00000560959 TRIM8Q9BZR9 551 aa17.78■□□□□ 0.44
TPM1-226ENST00000560959 FEZ2Q9UHY8 353 aaPredicted RBP17.78■□□□□ 0.44
TPM1-226ENST00000560959 NUP210LQ5VU65 1888 aa17.78■□□□□ 0.44
TPM1-226ENST00000560959 MYO7BQ6PIF6 2116 aa17.77■□□□□ 0.44
TPM1-226ENST00000560959 ISM1B1AKI9 464 aa17.77■□□□□ 0.44
TPM1-226ENST00000560959 USP1O94782 785 aa17.77■□□□□ 0.44
TPM1-226ENST00000560959 MBD3O95983 291 aa17.77■□□□□ 0.44
TPM1-226ENST00000560959 CAPN3P20807 821 aa17.77■□□□□ 0.44
TPM1-226ENST00000560959 AGAP20933 346 aa17.77■□□□□ 0.44
TPM1-226ENST00000560959 FDXRP22570 491 aa17.77■□□□□ 0.44
TPM1-226ENST00000560959 TNFSF10P50591 281 aa17.77■□□□□ 0.44
TPM1-226ENST00000560959 UBASH3AP57075 661 aa17.77■□□□□ 0.44
TPM1-226ENST00000560959 ARG2P78540 354 aa17.77■□□□□ 0.44
TPM1-226ENST00000560959 GRM7Q14831 915 aa17.77■□□□□ 0.44
TPM1-226ENST00000560959 TESK1Q15569 626 aa17.77■□□□□ 0.44
TPM1-226ENST00000560959 FAM214AQ32MH5 1076 aa17.77■□□□□ 0.44
TPM1-226ENST00000560959 TFDP3Q5H9I0 405 aa17.77■□□□□ 0.44
TPM1-226ENST00000560959 ZC3H12BQ5HYM0 836 aaKnown RBP17.77■□□□□ 0.44
TPM1-226ENST00000560959 SPNS3Q6ZMD2 512 aa17.77■□□□□ 0.44
TPM1-226ENST00000560959 SERPINA9Q86WD7 417 aa17.77■□□□□ 0.44
TPM1-226ENST00000560959 CLDN19Q8N6F1 224 aa17.77■□□□□ 0.44
TPM1-226ENST00000560959 SLC22A18Q96BI1 424 aa17.77■□□□□ 0.44
TPM1-226ENST00000560959 ZNF285Q96NJ3 590 aa17.77■□□□□ 0.44
TPM1-226ENST00000560959 GBP4Q96PP9 640 aa17.77■□□□□ 0.44
TPM1-226ENST00000560959 ARNT2Q9HBZ2 717 aa17.77■□□□□ 0.44
TPM1-226ENST00000560959 CUTCQ9NTM9 273 aa17.77■□□□□ 0.44
TPM1-226ENST00000560959 ABI3Q9P2A4 366 aa17.77■□□□□ 0.44
TPM1-226ENST00000560959 TRGV8A0A0C4DH27 118 aa17.76■□□□□ 0.43
TPM1-226ENST00000560959 FITM1A5D6W6 292 aa17.76■□□□□ 0.43
TPM1-226ENST00000560959 CCL21O00585 134 aa17.76■□□□□ 0.43
TPM1-226ENST00000560959 PEBP1P30086 187 aaKnown RBP17.76■□□□□ 0.43
TPM1-226ENST00000560959 SSTR2P30874 369 aa17.76■□□□□ 0.43
TPM1-226ENST00000560959 MC4RP32245 332 aa17.76■□□□□ 0.43
TPM1-226ENST00000560959 CA7P43166 264 aa17.76■□□□□ 0.43
TPM1-226ENST00000560959 TCEAL1Q15170 157 aa17.76■□□□□ 0.43
TPM1-226ENST00000560959 ATG9BQ674R7 924 aa17.76■□□□□ 0.43
TPM1-226ENST00000560959 KAZNQ674X7 775 aa17.76■□□□□ 0.43
TPM1-226ENST00000560959 TMTC1Q8IUR5 882 aa17.76■□□□□ 0.43
TPM1-226ENST00000560959 KBTBD2Q8IY47 623 aa17.76■□□□□ 0.43
TPM1-226ENST00000560959 MAGEB10Q96LZ2 347 aaPredicted RBP17.76■□□□□ 0.43
TPM1-226ENST00000560959 FERMT1Q9BQL6 677 aa17.76■□□□□ 0.43
TPM1-226ENST00000560959 SOX17Q9H6I2 414 aaPredicted RBP17.76■□□□□ 0.43
TPM1-226ENST00000560959 TDRKHQ9Y2W6 561 aaKnown RBP17.76■□□□□ 0.43
TPM1-226ENST00000560959 PSTPIP1O43586 416 aa17.75■□□□□ 0.43
TPM1-226ENST00000560959 CRYABP02511 175 aaKnown RBP17.75■□□□□ 0.43
TPM1-226ENST00000560959 MAGP20916 626 aa17.75■□□□□ 0.43
TPM1-226ENST00000560959 SOX11P35716 441 aa17.75■□□□□ 0.43
TPM1-226ENST00000560959 NSG1P42857 185 aa17.75■□□□□ 0.43
TPM1-226ENST00000560959 CDKN1CP49918 316 aaPredicted RBP17.75■□□□□ 0.43
TPM1-226ENST00000560959 PRPSAP1Q14558 356 aa17.75■□□□□ 0.43
TPM1-226ENST00000560959 ZNF295-AS1Q8N0V1 137 aa17.75■□□□□ 0.43
TPM1-226ENST00000560959 PSMF1Q92530 271 aa17.75■□□□□ 0.43
TPM1-226ENST00000560959 PPP1R2P1Q96PQ5 205 aa17.75■□□□□ 0.43
TPM1-226ENST00000560959 INTS7Q9NVH2 962 aaKnown RBP17.75■□□□□ 0.43
TPM1-226ENST00000560959 CTSFQ9UBX1 484 aa17.75■□□□□ 0.43
TPM1-226ENST00000560959 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.75■□□□□ 0.431e-6■■■□□ 19.1
TPM1-226ENST00000560959 PKDREJQ9NTG1 2253 aa17.75■□□□□ 0.43
TPM1-226ENST00000560959 CCDC168Q8NDH2 2452 aa17.74■□□□□ 0.43
TPM1-226ENST00000560959 SLC5A10A0PJK1 596 aa17.74■□□□□ 0.43
TPM1-226ENST00000560959 BHMG1C9JSJ3 638 aaPredicted RBP17.74■□□□□ 0.43
TPM1-226ENST00000560959 GOLGA6L22H0YM25 854 aa17.74■□□□□ 0.43
TPM1-226ENST00000560959 SRPX2O60687 465 aaPredicted RBP17.74■□□□□ 0.43
TPM1-226ENST00000560959 FKBP9O95302 570 aa17.74■□□□□ 0.43
TPM1-226ENST00000560959 FTH1P02794 183 aa17.74■□□□□ 0.43
TPM1-226ENST00000560959 ACPPP15309 386 aa17.74■□□□□ 0.43
TPM1-226ENST00000560959 COMTP21964 271 aa17.74■□□□□ 0.43
TPM1-226ENST00000560959 RAB28P51157 221 aa17.74■□□□□ 0.43
TPM1-226ENST00000560959 RBPJQ06330 500 aa17.74■□□□□ 0.43
TPM1-226ENST00000560959 DENND5AQ6IQ26 1287 aa17.74■□□□□ 0.43
TPM1-226ENST00000560959 TAS2R42Q7RTR8 314 aa17.74■□□□□ 0.43
TPM1-226ENST00000560959 RCOR2Q8IZ40 523 aa17.74■□□□□ 0.43
TPM1-226ENST00000560959 TTC29Q8NA56 475 aaPredicted RBP17.74■□□□□ 0.43
TPM1-226ENST00000560959 CCDC110Q8TBZ0 833 aa17.74■□□□□ 0.43
TPM1-226ENST00000560959 APOL2Q9BQE5 337 aa17.74■□□□□ 0.43
TPM1-226ENST00000560959 ITGB1BP2Q9UKP3 347 aa17.74■□□□□ 0.43
TPM1-226ENST00000560959 MRPS2Q9Y399 296 aaKnown RBP17.74■□□□□ 0.43
TPM1-226ENST00000560959 hCG_1818297A0A087WSY0 165 aa17.73■□□□□ 0.43
TPM1-226ENST00000560959 A0A1W2PQ72 361 aa17.73■□□□□ 0.43
TPM1-226ENST00000560959 SPOPO43791 374 aa17.73■□□□□ 0.43
TPM1-226ENST00000560959 ZRANB2O95218 330 aaKnown RBP eCLIP17.73■□□□□ 0.43
TPM1-226ENST00000560959 S1PR4O95977 384 aa17.73■□□□□ 0.43
TPM1-226ENST00000560959 MYBL2P10244 700 aa17.73■□□□□ 0.43
TPM1-226ENST00000560959 TNNT1P13805 278 aa17.73■□□□□ 0.43
TPM1-226ENST00000560959 RBL1P28749 1068 aa17.73■□□□□ 0.43
TPM1-226ENST00000560959 TPM4P67936 248 aa17.73■□□□□ 0.43
TPM1-226ENST00000560959 CACNG1Q06432 222 aa17.73■□□□□ 0.43
TPM1-226ENST00000560959 ITIH4Q14624 930 aa17.73■□□□□ 0.43
TPM1-226ENST00000560959 DNAJC21Q5F1R6 531 aaKnown RBP17.73■□□□□ 0.43
TPM1-226ENST00000560959 PACS1Q6VY07 963 aa17.73■□□□□ 0.43
TPM1-226ENST00000560959 SHISA6Q6ZSJ9 500 aa17.73■□□□□ 0.43
TPM1-226ENST00000560959 NDUFAF7Q7L592 441 aa17.73■□□□□ 0.43
TPM1-226ENST00000560959 NLRP9Q7RTR0 991 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms