RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 OR6C2Q9NZP2 312 aa2.29□□□□□ -2.04
SRP54-207ENST00000555535 CORO1CQ9ULV4 474 aaPredicted RBP2.29□□□□□ -2.04
SRP54-207ENST00000555535 CSNK1G3Q9Y6M4 447 aa2.29□□□□□ -2.04
SRP54-207ENST00000555535 XRCC3O43542 346 aa2.28□□□□□ -2.04
SRP54-207ENST00000555535 OR10H2O60403 315 aa2.28□□□□□ -2.04
SRP54-207ENST00000555535 AVILO75366 819 aa2.28□□□□□ -2.04
SRP54-207ENST00000555535 CREG1O75629 220 aa2.28□□□□□ -2.04
SRP54-207ENST00000555535 HOXD4P09016 255 aaPredicted RBP2.28□□□□□ -2.04
SRP54-207ENST00000555535 HSPA1AP0DMV8 641 aaKnown RBP2.28□□□□□ -2.04
SRP54-207ENST00000555535 HSPA1BP0DMV9 641 aaKnown RBP2.28□□□□□ -2.04
SRP54-207ENST00000555535 MGMTP16455 207 aa2.28□□□□□ -2.04
SRP54-207ENST00000555535 ETV5P41161 510 aa2.28□□□□□ -2.04
SRP54-207ENST00000555535 TPD52P55327 224 aaPredicted RBP2.28□□□□□ -2.04
SRP54-207ENST00000555535 SARM1Q6SZW1 724 aa2.28□□□□□ -2.04
SRP54-207ENST00000555535 PXKQ7Z7A4 578 aa2.28□□□□□ -2.04
SRP54-207ENST00000555535 PDILTQ8N807 584 aa2.28□□□□□ -2.04
SRP54-207ENST00000555535 NPEPL1Q8NDH3 523 aa2.28□□□□□ -2.04
SRP54-207ENST00000555535 GPRC5AQ8NFJ5 357 aa2.28□□□□□ -2.04
SRP54-207ENST00000555535 MAPK15Q8TD08 544 aa2.28□□□□□ -2.04
SRP54-207ENST00000555535 C1orf147Q96MC9 270 aaPredicted RBP2.28□□□□□ -2.04
SRP54-207ENST00000555535 CMTM3Q96MX0 182 aa2.28□□□□□ -2.04
SRP54-207ENST00000555535 B3GAT1Q9P2W7 334 aa2.28□□□□□ -2.04
SRP54-207ENST00000555535 CTSZQ9UBR2 303 aa2.28□□□□□ -2.04
SRP54-207ENST00000555535 B4GALT7Q9UBV7 327 aa2.28□□□□□ -2.04
SRP54-207ENST00000555535 KIF25-AS1Q9Y6Z4 181 aa2.28□□□□□ -2.04
SRP54-207ENST00000555535 A0A087WUV0 522 aaPredicted RBP2.27□□□□□ -2.05
SRP54-207ENST00000555535 A0A1B0GVC2 190 aa2.27□□□□□ -2.05
SRP54-207ENST00000555535 SRRM4A7MD48 611 aaKnown RBP2.27□□□□□ -2.05
SRP54-207ENST00000555535 GLRA3O75311 464 aa2.27□□□□□ -2.05
SRP54-207ENST00000555535 CDK2AP2O75956 126 aa2.27□□□□□ -2.05
SRP54-207ENST00000555535 IGHEP01854 428 aa2.27□□□□□ -2.05
SRP54-207ENST00000555535 THEGLP0DJG4 465 aa2.27□□□□□ -2.05
SRP54-207ENST00000555535 MMP9P14780 707 aa2.27□□□□□ -2.05
SRP54-207ENST00000555535 RPL21P46778 160 aaKnown RBP2.27□□□□□ -2.05
SRP54-207ENST00000555535 ZFP36L2P47974 494 aaKnown RBP2.27□□□□□ -2.05
SRP54-207ENST00000555535 GUCY2DQ02846 1103 aa2.27□□□□□ -2.05
SRP54-207ENST00000555535 TAF10Q12962 218 aa2.27□□□□□ -2.05
SRP54-207ENST00000555535 DHX8Q14562 1220 aaKnown RBP2.27□□□□□ -2.05
SRP54-207ENST00000555535 PDLIM3Q53GG5 364 aaPredicted RBP2.27□□□□□ -2.05
SRP54-207ENST00000555535 CES4AQ5XG92 561 aa2.27□□□□□ -2.05
SRP54-207ENST00000555535 GDPGP1Q6ZNW5 385 aa2.27□□□□□ -2.05
SRP54-207ENST00000555535 CEACAM19Q7Z692 300 aa2.27□□□□□ -2.05
SRP54-207ENST00000555535 CFAP206Q8IYR0 622 aa2.27□□□□□ -2.05
SRP54-207ENST00000555535 MOSPD2Q8NHP6 518 aa2.27□□□□□ -2.05
SRP54-207ENST00000555535 TYMSOSQ8TAI1 123 aa2.27□□□□□ -2.05
SRP54-207ENST00000555535 APOBEC4Q8WW27 367 aaKnown RBP2.27□□□□□ -2.05
SRP54-207ENST00000555535 TOMM40LQ969M1 308 aa2.27□□□□□ -2.05
SRP54-207ENST00000555535 MOAP1Q96BY2 351 aa2.27□□□□□ -2.05
SRP54-207ENST00000555535 ATXN7L3BQ96GX2 97 aa2.27□□□□□ -2.05
SRP54-207ENST00000555535 LMF2Q9BU23 707 aaKnown RBP2.27□□□□□ -2.05
SRP54-207ENST00000555535 TDRD1Q9BXT4 1180 aaKnown RBP2.27□□□□□ -2.05
SRP54-207ENST00000555535 MUC13Q9H3R2 512 aa2.27□□□□□ -2.05
SRP54-207ENST00000555535 CHMP1AQ9HD42 196 aaPredicted RBP2.27□□□□□ -2.05
SRP54-207ENST00000555535 ZNF107Q9UII5 783 aaPredicted RBP2.27□□□□□ -2.05
SRP54-207ENST00000555535 SESN1Q9Y6P5 492 aa2.27□□□□□ -2.05
SRP54-207ENST00000555535 PCDH11YQ9BZA8 1340 aa2.26□□□□□ -2.05
SRP54-207ENST00000555535 HCFC1P51610 2035 aa2.26□□□□□ -2.05
SRP54-207ENST00000555535 A8MXK9 166 aa2.26□□□□□ -2.05
SRP54-207ENST00000555535 SHISA9B4DS77 424 aa2.26□□□□□ -2.05
SRP54-207ENST00000555535 LRCH4O75427 683 aa2.26□□□□□ -2.05
SRP54-207ENST00000555535 TMEM63AO94886 807 aa2.26□□□□□ -2.05
SRP54-207ENST00000555535 DDX58O95786 925 aaKnown RBP2.26□□□□□ -2.05
SRP54-207ENST00000555535 SLC2A2P11168 524 aaPredicted RBP2.26□□□□□ -2.05
SRP54-207ENST00000555535 PSMA4P25789 261 aaKnown RBP2.26□□□□□ -2.05
SRP54-207ENST00000555535 GABRA5P31644 462 aa2.26□□□□□ -2.05
SRP54-207ENST00000555535 MTHFSDQ2M296 383 aaKnown RBP2.26□□□□□ -2.05
SRP54-207ENST00000555535 EIPR1Q53HC9 387 aa2.26□□□□□ -2.05
SRP54-207ENST00000555535 OLFML2AQ68BL7 652 aa2.26□□□□□ -2.05
SRP54-207ENST00000555535 FIGLAQ6QHK4 219 aa2.26□□□□□ -2.05
SRP54-207ENST00000555535 NHLRC1Q6VVB1 395 aa2.26□□□□□ -2.05
SRP54-207ENST00000555535 FRRS1Q6ZNA5 592 aa2.26□□□□□ -2.05
SRP54-207ENST00000555535 TMTC3Q6ZXV5 915 aa2.26□□□□□ -2.05
SRP54-207ENST00000555535 MCEMP1Q8IX19 187 aa2.26□□□□□ -2.05
SRP54-207ENST00000555535 CDK20Q8IZL9 346 aa2.26□□□□□ -2.05
SRP54-207ENST00000555535 KLHL30-AS1Q8NEE0 82 aa2.26□□□□□ -2.05
SRP54-207ENST00000555535 URM1Q9BTM9 101 aaKnown RBP2.26□□□□□ -2.05
SRP54-207ENST00000555535 KIFC3Q9BVG8 833 aa2.26□□□□□ -2.05
SRP54-207ENST00000555535 FNDC11Q9BVV2 318 aa2.26□□□□□ -2.05
SRP54-207ENST00000555535 SH2D4AQ9H788 454 aa2.26□□□□□ -2.05
SRP54-207ENST00000555535 LARSQ9P2J5 1176 aaKnown RBP2.26□□□□□ -2.05
SRP54-207ENST00000555535 THAP10Q9P2Z0 257 aaPredicted RBP2.26□□□□□ -2.05
SRP54-207ENST00000555535 LOC105371242A0A075B767 164 aa2.25□□□□□ -2.05
SRP54-207ENST00000555535 ENO4A6NNW6 628 aa2.25□□□□□ -2.05
SRP54-207ENST00000555535 GPRIN2O60269 458 aa2.25□□□□□ -2.05
SRP54-207ENST00000555535 RNASEH2AO75792 299 aaKnown RBP2.25□□□□□ -2.05
SRP54-207ENST00000555535 AGR2O95994 175 aa2.25□□□□□ -2.05
SRP54-207ENST00000555535 HSPA8P11142 646 aaKnown RBP2.25□□□□□ -2.05
SRP54-207ENST00000555535 DARSP14868 501 aaKnown RBP2.25□□□□□ -2.05
SRP54-207ENST00000555535 CDH3P22223 829 aa2.25□□□□□ -2.05
SRP54-207ENST00000555535 HLA-FP30511 346 aa2.25□□□□□ -2.05
SRP54-207ENST00000555535 CLCN4P51793 760 aa2.25□□□□□ -2.05
SRP54-207ENST00000555535 XGP55808 180 aa2.25□□□□□ -2.05
SRP54-207ENST00000555535 PRAMEP78395 509 aa2.25□□□□□ -2.05
SRP54-207ENST00000555535 ZNF415Q09FC8 603 aa2.25□□□□□ -2.05
SRP54-207ENST00000555535 KRT33BQ14525 404 aa2.25□□□□□ -2.05
SRP54-207ENST00000555535 EFTUD2Q15029 972 aaKnown RBP eCLIP2.25□□□□□ -2.05
SRP54-207ENST00000555535 ZNF841Q6ZN19 808 aa2.25□□□□□ -2.05
SRP54-207ENST00000555535 ADCK1Q86TW2 530 aa2.25□□□□□ -2.05
SRP54-207ENST00000555535 SLC25A42Q86VD7 318 aa2.25□□□□□ -2.05
SRP54-207ENST00000555535 TEX11Q8IYF3 940 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms