RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-223ENST00000509900 CA9Q16790 459 aa9.12□□□□□ -0.95
PTPN20-223ENST00000509900 VWA3BQ502W6 1294 aa9.12□□□□□ -0.95
PTPN20-223ENST00000509900 ANKRD20A8PQ5CZ79 823 aa9.12□□□□□ -0.95
PTPN20-223ENST00000509900 TFDP3Q5H9I0 405 aa9.12□□□□□ -0.95
PTPN20-223ENST00000509900 ZNF658Q5TYW1 1059 aaPredicted RBP9.12□□□□□ -0.95
PTPN20-223ENST00000509900 ABHD17BQ5VST6 288 aa9.12□□□□□ -0.95
PTPN20-223ENST00000509900 TTI2Q6NXR4 508 aa9.12□□□□□ -0.95
PTPN20-223ENST00000509900 TLDC1Q6P9B6 456 aa9.12□□□□□ -0.95
PTPN20-223ENST00000509900 TRAM1L1Q8N609 369 aa9.12□□□□□ -0.95
PTPN20-223ENST00000509900 C19orf47Q8N9M1 422 aaKnown RBP9.12□□□□□ -0.95
PTPN20-223ENST00000509900 MSANTD4Q8NCY6 345 aa9.12□□□□□ -0.95
PTPN20-223ENST00000509900 MDS2Q8NDY4 140 aa9.12□□□□□ -0.95
PTPN20-223ENST00000509900 C12orf66Q96MD2 445 aa9.12□□□□□ -0.95
PTPN20-223ENST00000509900 SIGLEC12Q96PQ1 595 aa9.12□□□□□ -0.95
PTPN20-223ENST00000509900 CRB3Q9BUF7 120 aa9.12□□□□□ -0.95
PTPN20-223ENST00000509900 WWP1Q9H0M0 922 aa9.12□□□□□ -0.95
PTPN20-223ENST00000509900 KLHL1Q9NR64 748 aa9.12□□□□□ -0.95
PTPN20-223ENST00000509900 NXT1Q9UKK6 140 aaKnown RBP9.12□□□□□ -0.95
PTPN20-223ENST00000509900 CBLCQ9ULV8 474 aa9.12□□□□□ -0.95
PTPN20-223ENST00000509900 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.12□□□□□ -0.95
PTPN20-223ENST00000509900 DYSFO75923 2080 aa9.12□□□□□ -0.95
PTPN20-223ENST00000509900 USF3Q68DE3 2245 aa9.12□□□□□ -0.95
PTPN20-223ENST00000509900 CR1P17927 2039 aa9.11□□□□□ -0.95
PTPN20-223ENST00000509900 A0A1B0GX78 115 aa9.11□□□□□ -0.95
PTPN20-223ENST00000509900 EEF2KO00418 725 aaKnown RBP9.11□□□□□ -0.95
PTPN20-223ENST00000509900 MAFKO60675 156 aa9.11□□□□□ -0.95
PTPN20-223ENST00000509900 IFNA2P01563 188 aa9.11□□□□□ -0.95
PTPN20-223ENST00000509900 GPD1P21695 349 aa9.11□□□□□ -0.95
PTPN20-223ENST00000509900 MMP8P22894 467 aa9.11□□□□□ -0.95
PTPN20-223ENST00000509900 AIF1P55008 147 aa9.11□□□□□ -0.95
PTPN20-223ENST00000509900 STX17P56962 302 aa9.11□□□□□ -0.95
PTPN20-223ENST00000509900 NUP107P57740 925 aa9.11□□□□□ -0.95
PTPN20-223ENST00000509900 DCDC1P59894 354 aa9.11□□□□□ -0.95
PTPN20-223ENST00000509900 TYRO3Q06418 890 aa9.11□□□□□ -0.95
PTPN20-223ENST00000509900 PMPCAQ10713 525 aa9.11□□□□□ -0.95
PTPN20-223ENST00000509900 TMEM115Q12893 351 aaPredicted RBP9.11□□□□□ -0.95
PTPN20-223ENST00000509900 KRTAP24-1Q3LI83 254 aa9.11□□□□□ -0.95
PTPN20-223ENST00000509900 METRNLQ641Q3 311 aa9.11□□□□□ -0.95
PTPN20-223ENST00000509900 PDPK2PQ6A1A2 396 aa9.11□□□□□ -0.95
PTPN20-223ENST00000509900 TXNRD3NBQ6F5E7 133 aa9.11□□□□□ -0.95
PTPN20-223ENST00000509900 WDR59Q6PJI9 974 aa9.11□□□□□ -0.95
PTPN20-223ENST00000509900 RFX8Q6ZV50 586 aa9.11□□□□□ -0.95
PTPN20-223ENST00000509900 TTLL10Q6ZVT0 673 aa9.11□□□□□ -0.95
PTPN20-223ENST00000509900 NEK10Q6ZWH5 1172 aa9.11□□□□□ -0.95
PTPN20-223ENST00000509900 NDUFAF7Q7L592 441 aa9.11□□□□□ -0.95
PTPN20-223ENST00000509900 TRIM73Q86UV7 250 aa9.11□□□□□ -0.95
PTPN20-223ENST00000509900 LPCAT1Q8NF37 534 aa9.11□□□□□ -0.95
PTPN20-223ENST00000509900 CCHCR1Q8TD31 782 aa9.11□□□□□ -0.95
PTPN20-223ENST00000509900 SCMH1Q96GD3 660 aa9.11□□□□□ -0.95
PTPN20-223ENST00000509900 TDRD1Q9BXT4 1180 aaKnown RBP9.11□□□□□ -0.95
PTPN20-223ENST00000509900 SRMSQ9H3Y6 488 aa9.11□□□□□ -0.95
PTPN20-223ENST00000509900 NT5MQ9NPB1 228 aa9.11□□□□□ -0.95
PTPN20-223ENST00000509900 SIX2Q9NPC8 291 aa9.11□□□□□ -0.95
PTPN20-223ENST00000509900 NFKBIL1Q9UBC1 381 aaPredicted RBP9.11□□□□□ -0.95
PTPN20-223ENST00000509900 RCOR1Q9UKL0 485 aa9.11□□□□□ -0.95
PTPN20-223ENST00000509900 SVEP1Q4LDE5 3571 aa9.11□□□□□ -0.95
PTPN20-223ENST00000509900 DSCAMO60469 2012 aa9.1□□□□□ -0.95
PTPN20-223ENST00000509900 FAM237AA0A1B0GTK4 181 aa9.1□□□□□ -0.95
PTPN20-223ENST00000509900 A0A1W2PQ72 361 aa9.1□□□□□ -0.95
PTPN20-223ENST00000509900 MMEP08473 750 aa9.1□□□□□ -0.95
PTPN20-223ENST00000509900 KRT3P12035 628 aa9.1□□□□□ -0.95
PTPN20-223ENST00000509900 EEF1DP29692 281 aaKnown RBP9.1□□□□□ -0.95
PTPN20-223ENST00000509900 PTGS2P35354 604 aa9.1□□□□□ -0.95
PTPN20-223ENST00000509900 BPIFB4P59827 614 aa9.1□□□□□ -0.95
PTPN20-223ENST00000509900 EEF1A2Q05639 463 aaKnown RBP9.1□□□□□ -0.95
PTPN20-223ENST00000509900 ZNF33BQ06732 778 aa9.1□□□□□ -0.95
PTPN20-223ENST00000509900 KLC1Q07866 573 aa9.1□□□□□ -0.95
PTPN20-223ENST00000509900 ATP13A4Q4VNC1 1196 aa9.1□□□□□ -0.95
PTPN20-223ENST00000509900 MARC1Q5VT66 337 aa9.1□□□□□ -0.95
PTPN20-223ENST00000509900 CNSTQ6PJW8 725 aa9.1□□□□□ -0.95
PTPN20-223ENST00000509900 NOP9Q86U38 636 aaKnown RBP9.1□□□□□ -0.95
PTPN20-223ENST00000509900 P3H2Q8IVL5 708 aa9.1□□□□□ -0.95
PTPN20-223ENST00000509900 BBS5Q8N3I7 341 aa9.1□□□□□ -0.95
PTPN20-223ENST00000509900 DTWD1Q8N5C7 304 aa9.1□□□□□ -0.95
PTPN20-223ENST00000509900 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.1□□□□□ -0.95
PTPN20-223ENST00000509900 RASGEF1AQ8N9B8 481 aa9.1□□□□□ -0.95
PTPN20-223ENST00000509900 LCN9Q8WX39 176 aa9.1□□□□□ -0.95
PTPN20-223ENST00000509900 FOXD4L4Q8WXT5 416 aaPredicted RBP9.1□□□□□ -0.95
PTPN20-223ENST00000509900 RMDN2Q96LZ7 410 aa9.1□□□□□ -0.95
PTPN20-223ENST00000509900 C11orf70Q9BRQ4 267 aa9.1□□□□□ -0.95
PTPN20-223ENST00000509900 CHRNA10Q9GZZ6 450 aa9.1□□□□□ -0.95
PTPN20-223ENST00000509900 IRAK4Q9NWZ3 460 aa9.1□□□□□ -0.95
PTPN20-223ENST00000509900 TAS2R14Q9NYV8 317 aa9.1□□□□□ -0.95
PTPN20-223ENST00000509900 GNPTGQ9UJJ9 305 aa9.1□□□□□ -0.95
PTPN20-223ENST00000509900 DNAJC12Q9UKB3 198 aa9.1□□□□□ -0.95
PTPN20-223ENST00000509900 HEATR5AQ86XA9 2040 aa9.09□□□□□ -0.95
PTPN20-223ENST00000509900 IGHV1-45A0A0A0MS14 117 aa9.09□□□□□ -0.95
PTPN20-223ENST00000509900 A0A1B0GTH9 108 aa9.09□□□□□ -0.95
PTPN20-223ENST00000509900 GTPBP10A4D1E9 387 aaKnown RBP9.09□□□□□ -0.95
PTPN20-223ENST00000509900 DSCR3O14972 297 aa9.09□□□□□ -0.95
PTPN20-223ENST00000509900 DAPK3O43293 454 aa9.09□□□□□ -0.95
PTPN20-223ENST00000509900 MT-CYBP00156 380 aaPredicted RBP9.09□□□□□ -0.95
PTPN20-223ENST00000509900 PIM1P11309 404 aaPredicted RBP9.09□□□□□ -0.95
PTPN20-223ENST00000509900 PON1P27169 355 aa9.09□□□□□ -0.95
PTPN20-223ENST00000509900 PBLDP30039 288 aaPredicted RBP9.09□□□□□ -0.95
PTPN20-223ENST00000509900 OR1D4P47884 311 aa9.09□□□□□ -0.95
PTPN20-223ENST00000509900 CARSP49589 748 aaKnown RBP9.09□□□□□ -0.95
PTPN20-223ENST00000509900 ST13P50502 369 aaKnown RBP9.09□□□□□ -0.95
PTPN20-223ENST00000509900 RAB28P51157 221 aa9.09□□□□□ -0.95
PTPN20-223ENST00000509900 RPL26P61254 145 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms