RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 GBP6Q6ZN66 633 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 SHISA6Q6ZSJ9 500 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 CEP128Q6ZU80 1094 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 BTLAQ7Z6A9 289 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 AMZ2Q86W34 360 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 TRAPPC5Q8IUR0 188 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 KBTBD2Q8IY47 623 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 ZZZ3Q8IYH5 903 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 ARMC10Q8N2F6 343 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 TAB3Q8N5C8 712 aaPredicted RBP6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 TEX26Q8N6G2 289 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 ZNF655Q8N720 491 aaPredicted RBP6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 AMER2Q8N7J2 671 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 SLC20A1Q8WUM9 679 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 C8orf44Q96CB5 159 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 DHTKD1Q96HY7 919 aaPredicted RBP6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 SPATA32Q96LK8 384 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 FRMD6Q96NE9 622 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 C11orf70Q9BRQ4 267 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 PHACTR1Q9C0D0 580 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 CHRNA10Q9GZZ6 450 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 SOX17Q9H6I2 414 aaPredicted RBP6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 TXLNGQ9NUQ3 528 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 RMND1Q9NWS8 449 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 TRPS1Q9UHF7 1281 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 NOCTQ9UK39 431 aaKnown RBP6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 DNAJC12Q9UKB3 198 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 EDARQ9UNE0 448 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 CHKBQ9Y259 395 aa6.8□□□□□ -1.32
PDLIM1-203ENST00000490391 SCN2AQ99250 2005 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 CMYA5Q8N3K9 4069 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 TCRBV5S1A1TA0A578 114 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 GTPBP10A4D1E9 387 aaKnown RBP6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 VSTM2BA6NLU5 285 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 NPIPA5E9PKD4 350 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 H7C1Q1 480 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 PSMA7O14818 248 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 POP7O75817 140 aaKnown RBP6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 BMP10O95393 424 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 F13A1P00488 732 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 SERPINA7P05543 415 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 NEFLP07196 543 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 COX6A1P12074 109 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 ACPPP15309 386 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 STX17P56962 302 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 RPL26P61254 145 aaKnown RBP6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 KRT85P78386 507 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 ALDH6A1Q02252 535 aaKnown RBP6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 TMEM115Q12893 351 aaPredicted RBP6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 XRCC4Q13426 336 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 DPYSQ14117 519 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 EXOC3L4Q17RC7 722 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 ATP13A4Q4VNC1 1196 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 VWA3BQ502W6 1294 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 ZNF766Q5HY98 468 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 METRNLQ641Q3 311 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 CBLL1Q75N03 491 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 CCDC71Q8IV32 467 aaPredicted RBP6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 AGGF1Q8N302 714 aaeCLIP6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 RPRMLQ8N4K4 120 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 SIMC1Q8NDZ2 872 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 LPCAT1Q8NF37 534 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 OR4E2Q8NGC2 313 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 CCDC110Q8TBZ0 833 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 RMDN2Q96LZ7 410 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 GSDMAQ96QA5 445 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 VPS35Q96QK1 796 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 NAA15Q9BXJ9 866 aaKnown RBP6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 HES7Q9BYE0 225 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 DEF6Q9H4E7 631 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 C7orf69Q9H7B7 122 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 NT5MQ9NPB1 228 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 ETNK2Q9NVF9 386 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 FANCLQ9NW38 375 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 CFAP45Q9UL16 551 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 NPIPA1Q9UND3 350 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 RPL26L1Q9UNX3 145 aaKnown RBP6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 AP4E1Q9UPM8 1137 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 RYR3Q15413 4870 aa6.79□□□□□ -1.32
PDLIM1-203ENST00000490391 EIF3CLB5ME19 914 aaKnown RBP6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 PRRG2O14669 202 aa6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 MLYCDO95822 493 aa6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 GNA14O95837 355 aa6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 PYGMP11217 842 aa6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 ARSEP51690 589 aa6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 RPL7AP62424 266 aaKnown RBP6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 NKX6-1P78426 367 aaPredicted RBP6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 DSC2Q02487 901 aa6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 MARC1Q5VT66 337 aa6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 SHEQ5VZ18 495 aa6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 KRTAP5-3Q6L8H2 238 aa6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 TLDC1Q6P9B6 456 aa6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 CYP4V2Q6ZWL3 525 aaPredicted RBP6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 CXorf67Q86X51 503 aaPredicted RBP6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 ADGRF3Q8IZF5 1079 aa6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 CLYBLQ8N0X4 340 aa6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 EID3Q8N140 333 aa6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 GHDCQ8N2G8 530 aa6.78□□□□□ -1.32
PDLIM1-203ENST00000490391 BBS5Q8N3I7 341 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms