RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 CARSP49589 748 aaKnown RBP9□□□□□ -0.97
APP-213ENST00000464867 RAB28P51157 221 aa9□□□□□ -0.97
APP-213ENST00000464867 ZNF143P52747 638 aaPredicted RBP9□□□□□ -0.97
APP-213ENST00000464867 CTSCP53634 463 aa9□□□□□ -0.97
APP-213ENST00000464867 AP2B1P63010 937 aa9□□□□□ -0.97
APP-213ENST00000464867 PMP22Q01453 160 aa9□□□□□ -0.97
APP-213ENST00000464867 TMEM115Q12893 351 aaPredicted RBP9□□□□□ -0.97
APP-213ENST00000464867 OLIG2Q13516 323 aa9□□□□□ -0.97
APP-213ENST00000464867 PPP6R3Q5H9R7 873 aaPredicted RBP9□□□□□ -0.97
APP-213ENST00000464867 ABHD17BQ5VST6 288 aa9□□□□□ -0.97
APP-213ENST00000464867 C11orf96Q7Z7L8 435 aa9□□□□□ -0.97
APP-213ENST00000464867 SIRT6Q8N6T7 355 aa9□□□□□ -0.97
APP-213ENST00000464867 NPWQ8N729 165 aa9□□□□□ -0.97
APP-213ENST00000464867 UBASH3BQ8TF42 649 aa9□□□□□ -0.97
APP-213ENST00000464867 LCN9Q8WX39 176 aa9□□□□□ -0.97
APP-213ENST00000464867 TMEM158Q8WZ71 300 aa9□□□□□ -0.97
APP-213ENST00000464867 TBRG4Q969Z0 631 aaKnown RBP eCLIP9□□□□□ -0.97
APP-213ENST00000464867 SECISBP2Q96T21 854 aaKnown RBP9□□□□□ -0.97
APP-213ENST00000464867 PITPNM3Q9BZ71 974 aa9□□□□□ -0.97
APP-213ENST00000464867 UCK2Q9BZX2 261 aa9□□□□□ -0.97
APP-213ENST00000464867 KLHL25Q9H0H3 589 aa9□□□□□ -0.97
APP-213ENST00000464867 DEF6Q9H4E7 631 aa9□□□□□ -0.97
APP-213ENST00000464867 SOX17Q9H6I2 414 aaPredicted RBP9□□□□□ -0.97
APP-213ENST00000464867 ZFYVE1Q9HBF4 777 aa9□□□□□ -0.97
APP-213ENST00000464867 PCDH9Q9HC56 1237 aa9□□□□□ -0.97
APP-213ENST00000464867 SAMSN1Q9NSI8 373 aaKnown RBP9□□□□□ -0.97
APP-213ENST00000464867 TAS2R14Q9NYV8 317 aa9□□□□□ -0.97
APP-213ENST00000464867 DTLQ9NZJ0 730 aa9□□□□□ -0.97
APP-213ENST00000464867 LRFN1Q9P244 771 aa9□□□□□ -0.97
APP-213ENST00000464867 TEKT2Q9UIF3 430 aa9□□□□□ -0.97
APP-213ENST00000464867 HOOK1Q9UJC3 728 aaKnown RBP9□□□□□ -0.97
APP-213ENST00000464867 NSG1A0A0A6YYJ2 146 aa8.99□□□□□ -0.97
APP-213ENST00000464867 C2orf74A8MZ97 194 aa8.99□□□□□ -0.97
APP-213ENST00000464867 INAFM1C9JVW0 142 aa8.99□□□□□ -0.97
APP-213ENST00000464867 ARHGEF9O43307 516 aa8.99□□□□□ -0.97
APP-213ENST00000464867 ASNA1O43681 348 aa8.99□□□□□ -0.97
APP-213ENST00000464867 BMP10O95393 424 aa8.99□□□□□ -0.97
APP-213ENST00000464867 SERPINA7P05543 415 aa8.99□□□□□ -0.97
APP-213ENST00000464867 MMEP08473 750 aa8.99□□□□□ -0.97
APP-213ENST00000464867 SLC35G4P0C7Q5 338 aa8.99□□□□□ -0.97
APP-213ENST00000464867 PRR35P0CG20 571 aa8.99□□□□□ -0.97
APP-213ENST00000464867 NSG1P42857 185 aa8.99□□□□□ -0.97
APP-213ENST00000464867 ZNF135P52742 658 aaPredicted RBP8.99□□□□□ -0.97
APP-213ENST00000464867 ARSFP54793 590 aa8.99□□□□□ -0.97
APP-213ENST00000464867 DCDC1P59894 354 aa8.99□□□□□ -0.97
APP-213ENST00000464867 TFF3Q07654 80 aa8.99□□□□□ -0.97
APP-213ENST00000464867 NKG7Q16617 165 aa8.99□□□□□ -0.97
APP-213ENST00000464867 TFDP3Q5H9I0 405 aa8.99□□□□□ -0.97
APP-213ENST00000464867 ZNF766Q5HY98 468 aa8.99□□□□□ -0.97
APP-213ENST00000464867 SHEQ5VZ18 495 aa8.99□□□□□ -0.97
APP-213ENST00000464867 FBXW10Q5XX13 1052 aa8.99□□□□□ -0.97
APP-213ENST00000464867 HIBCHQ6NVY1 386 aaPredicted RBP8.99□□□□□ -0.97
APP-213ENST00000464867 PAMR1Q6UXH9 720 aa8.99□□□□□ -0.97
APP-213ENST00000464867 SHISA6Q6ZSJ9 500 aa8.99□□□□□ -0.97
APP-213ENST00000464867 NDUFAF7Q7L592 441 aa8.99□□□□□ -0.97
APP-213ENST00000464867 PHC2Q8IXK0 858 aa8.99□□□□□ -0.97
APP-213ENST00000464867 FAM20CQ8IXL6 584 aa8.99□□□□□ -0.97
APP-213ENST00000464867 ATPAF2Q8N5M1 289 aa8.99□□□□□ -0.97
APP-213ENST00000464867 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.99□□□□□ -0.97
APP-213ENST00000464867 ACVR1CQ8NER5 493 aa8.99□□□□□ -0.97
APP-213ENST00000464867 NELFBQ8WX92 580 aa8.99□□□□□ -0.97
APP-213ENST00000464867 RND1Q92730 232 aa8.99□□□□□ -0.97
APP-213ENST00000464867 GPATCH1Q9BRR8 931 aaKnown RBP8.99□□□□□ -0.97
APP-213ENST00000464867 TUBGCP2Q9BSJ2 902 aa8.99□□□□□ -0.97
APP-213ENST00000464867 CNPY3Q9BT09 278 aa8.99□□□□□ -0.97
APP-213ENST00000464867 TDRD1Q9BXT4 1180 aaKnown RBP8.99□□□□□ -0.97
APP-213ENST00000464867 ADGRE3Q9BY15 652 aa8.99□□□□□ -0.97
APP-213ENST00000464867 WWP1Q9H0M0 922 aa8.99□□□□□ -0.97
APP-213ENST00000464867 NLRC4Q9NPP4 1024 aa8.99□□□□□ -0.97
APP-213ENST00000464867 RASSF1Q9NS23 344 aa8.99□□□□□ -0.97
APP-213ENST00000464867 ADAM22Q9P0K1 906 aa8.99□□□□□ -0.97
APP-213ENST00000464867 ADAM21Q9UKJ8 722 aa8.99□□□□□ -0.97
APP-213ENST00000464867 ACSL5Q9ULC5 683 aa8.99□□□□□ -0.97
APP-213ENST00000464867 TTLL3Q9Y4R7 772 aa8.99□□□□□ -0.97
APP-213ENST00000464867 HEBP2Q9Y5Z4 205 aa8.99□□□□□ -0.97
APP-213ENST00000464867 CPAMD8Q8IZJ3 1885 aa8.99□□□□□ -0.97
APP-213ENST00000464867 SIGLEC16A6NMB1 481 aa8.98□□□□□ -0.97
APP-213ENST00000464867 ANKRD66B4E2M5 251 aa8.98□□□□□ -0.97
APP-213ENST00000464867 H3BRJ5 948 aa8.98□□□□□ -0.97
APP-213ENST00000464867 MAFKO60675 156 aa8.98□□□□□ -0.97
APP-213ENST00000464867 PEX11BO96011 259 aa8.98□□□□□ -0.97
APP-213ENST00000464867 PVRP15151 417 aa8.98□□□□□ -0.97
APP-213ENST00000464867 CXCR2P25025 360 aa8.98□□□□□ -0.97
APP-213ENST00000464867 EEF1DP29692 281 aaKnown RBP8.98□□□□□ -0.97
APP-213ENST00000464867 NSFP46459 744 aaKnown RBP8.98□□□□□ -0.97
APP-213ENST00000464867 KRT85P78386 507 aa8.98□□□□□ -0.97
APP-213ENST00000464867 NKX6-1P78426 367 aaPredicted RBP8.98□□□□□ -0.97
APP-213ENST00000464867 NFE2L1Q14494 772 aa8.98□□□□□ -0.97
APP-213ENST00000464867 ERMARDQ5T6L9 678 aa8.98□□□□□ -0.97
APP-213ENST00000464867 METRNLQ641Q3 311 aa8.98□□□□□ -0.97
APP-213ENST00000464867 ATG9BQ674R7 924 aa8.98□□□□□ -0.97
APP-213ENST00000464867 CNSTQ6PJW8 725 aa8.98□□□□□ -0.97
APP-213ENST00000464867 TTLL10Q6ZVT0 673 aa8.98□□□□□ -0.97
APP-213ENST00000464867 NOP9Q86U38 636 aaKnown RBP8.98□□□□□ -0.97
APP-213ENST00000464867 PAQR7Q86WK9 346 aa8.98□□□□□ -0.97
APP-213ENST00000464867 ZNF677Q86XU0 584 aa8.98□□□□□ -0.97
APP-213ENST00000464867 TMEM151BQ8IW70 566 aa8.98□□□□□ -0.97
APP-213ENST00000464867 ZZZ3Q8IYH5 903 aa8.98□□□□□ -0.97
APP-213ENST00000464867 C19orf47Q8N9M1 422 aaKnown RBP8.98□□□□□ -0.97
APP-213ENST00000464867 FAM98AQ8NCA5 519 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms