RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 HID1Q8IV36 788 aa13.94□□□□□ -0.18
LMX1B-202ENST00000373474 SLC30A8Q8IWU4 369 aa13.94□□□□□ -0.18
LMX1B-202ENST00000373474 XAGE5Q8WWM1 108 aa13.94□□□□□ -0.18
LMX1B-202ENST00000373474 C8orf48Q96LL4 319 aa13.94□□□□□ -0.18
LMX1B-202ENST00000373474 ZNF599Q96NL3 588 aa13.94□□□□□ -0.18
LMX1B-202ENST00000373474 GPER1Q99527 375 aa13.94□□□□□ -0.18
LMX1B-202ENST00000373474 FEM1AQ9BSK4 669 aa13.94□□□□□ -0.18
LMX1B-202ENST00000373474 EQTNQ9NQ60 294 aa13.94□□□□□ -0.18
LMX1B-202ENST00000373474 ZNF282Q9UDV7 671 aaPredicted RBP13.94□□□□□ -0.18
LMX1B-202ENST00000373474 PAFAH1B3Q15102 231 aaKnown RBP13.93□□□□□ -0.18
LMX1B-202ENST00000373474 HSD17B12Q53GQ0 312 aa13.93□□□□□ -0.18
LMX1B-202ENST00000373474 KLHL22Q53GT1 634 aa13.93□□□□□ -0.18
LMX1B-202ENST00000373474 ZNF697Q5TEC3 545 aa13.93□□□□□ -0.18
LMX1B-202ENST00000373474 CRYBG2Q8N1P7 616 aa13.93□□□□□ -0.18
LMX1B-202ENST00000373474 STOML3Q8TAV4 291 aa13.93□□□□□ -0.18
LMX1B-202ENST00000373474 TWNKQ96RR1 684 aa13.93□□□□□ -0.18
LMX1B-202ENST00000373474 RNF38Q9H0F5 515 aa13.93□□□□□ -0.18
LMX1B-202ENST00000373474 TREM1Q9NP99 234 aa13.93□□□□□ -0.18
LMX1B-202ENST00000373474 RIIAD1A6NNX1 92 aa13.93□□□□□ -0.18
LMX1B-202ENST00000373474 IQCF5A8MTL0 148 aa13.93□□□□□ -0.18
LMX1B-202ENST00000373474 POP4O95707 220 aaKnown RBP13.93□□□□□ -0.18
LMX1B-202ENST00000373474 MYCLP1P12525 358 aaPredicted RBP13.93□□□□□ -0.18
LMX1B-202ENST00000373474 NSG1P42857 185 aa13.93□□□□□ -0.18
LMX1B-202ENST00000373474 LARS2Q15031 903 aaKnown RBP13.93□□□□□ -0.18
LMX1B-202ENST00000373474 TMEM17Q86X19 198 aa13.93□□□□□ -0.18
LMX1B-202ENST00000373474 ZFAND2BQ8WV99 257 aa13.93□□□□□ -0.18
LMX1B-202ENST00000373474 HBEGFQ99075 208 aa13.93□□□□□ -0.18
LMX1B-202ENST00000373474 RUVBL1Q9Y265 456 aaKnown RBP13.93□□□□□ -0.18
LMX1B-202ENST00000373474 ACSL1P33121 698 aa13.93□□□□□ -0.18
LMX1B-202ENST00000373474 KIAA1324Q6UXG2 1013 aaKnown RBP13.93□□□□□ -0.18
LMX1B-202ENST00000373474 C2orf73Q8N5S3 287 aaPredicted RBP13.93□□□□□ -0.18
LMX1B-202ENST00000373474 ENDOVQ8N8Q3 282 aaKnown RBP13.93□□□□□ -0.18
LMX1B-202ENST00000373474 EXOSC8Q96B26 276 aaKnown RBP13.93□□□□□ -0.18
LMX1B-202ENST00000373474 C11orf16Q9NQ32 467 aa13.93□□□□□ -0.18
LMX1B-202ENST00000373474 PIGVQ9NUD9 493 aa13.93□□□□□ -0.18
LMX1B-202ENST00000373474 FNIP2Q9P278 1114 aa13.93□□□□□ -0.18
LMX1B-202ENST00000373474 GRK5P34947 590 aa13.93□□□□□ -0.18
LMX1B-202ENST00000373474 DNASE1L1P49184 302 aa13.93□□□□□ -0.18
LMX1B-202ENST00000373474 GAD2Q05329 585 aa13.93□□□□□ -0.18
LMX1B-202ENST00000373474 PCLAFQ15004 111 aa13.93□□□□□ -0.18
LMX1B-202ENST00000373474 DPY19L1Q2PZI1 675 aa13.93□□□□□ -0.18
LMX1B-202ENST00000373474 C4orf46Q504U0 113 aa13.93□□□□□ -0.18
LMX1B-202ENST00000373474 CYP2U1Q7Z449 544 aa13.93□□□□□ -0.18
LMX1B-202ENST00000373474 SNX20Q7Z614 316 aa13.93□□□□□ -0.18
LMX1B-202ENST00000373474 EGFL6Q8IUX8 553 aa13.93□□□□□ -0.18
LMX1B-202ENST00000373474 SRFBP1Q8NEF9 429 aaKnown RBP13.93□□□□□ -0.18
LMX1B-202ENST00000373474 OR10G6Q8NH81 332 aa13.93□□□□□ -0.18
LMX1B-202ENST00000373474 GTPBP3Q969Y2 492 aaKnown RBP13.93□□□□□ -0.18
LMX1B-202ENST00000373474 CHIAQ9BZP6 476 aa13.93□□□□□ -0.18
LMX1B-202ENST00000373474 IL1RAPQ9NPH3 570 aa13.93□□□□□ -0.18
LMX1B-202ENST00000373474 LRRC37A3O60309 1634 aa13.93□□□□□ -0.18
LMX1B-202ENST00000373474 OR2AG2A6NM03 316 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 K7EPI3 171 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 CDK14O94921 469 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 ARCN1P48444 511 aaKnown RBP13.92□□□□□ -0.18
LMX1B-202ENST00000373474 SIRPB2Q5JXA9 342 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 C6orf183Q5T699 404 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 ZC3HC1Q86WB0 502 aaKnown RBP13.92□□□□□ -0.18
LMX1B-202ENST00000373474 CLIP3Q96DZ5 547 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 BORCS6Q96GS4 357 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 ZNF350Q9GZX5 532 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 ZBTB26Q9HCK0 441 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 ZIM2Q9NZV7 527 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 RGPD8O14715 1765 aaPredicted RBP13.92□□□□□ -0.18
LMX1B-202ENST00000373474 KDM3BQ7LBC6 1761 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 ECI2O75521 394 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 NCCRP1Q6ZVX7 275 aaPredicted RBP13.92□□□□□ -0.18
LMX1B-202ENST00000373474 USP30Q70CQ3 517 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 CMTR2Q8IYT2 770 aaKnown RBP13.92□□□□□ -0.18
LMX1B-202ENST00000373474 OR13C4Q8NGS5 318 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 PLEKHO2Q8TD55 490 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 SNX33Q8WV41 574 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 C7orf43Q8WVR3 580 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 ESAMQ96AP7 390 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.92□□□□□ -0.18
LMX1B-202ENST00000373474 H3BNH8 94 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 DLX3O60479 287 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 CPNE3O75131 537 aaKnown RBP13.92□□□□□ -0.18
LMX1B-202ENST00000373474 GADD45GO95257 159 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 EOMESO95936 686 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 FAM163BP0C2L3 166 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 KLF1Q13351 362 aaPredicted RBP13.92□□□□□ -0.18
LMX1B-202ENST00000373474 PRAMEF17Q5VTA0 474 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 OGFOD2Q6N063 350 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 SLC35F5Q8WV83 523 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 SLC38A4Q969I6 547 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 CDADC1Q9BWV3 514 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 IKZF2Q9UKS7 526 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 NEMP2A6NFY4 417 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 UGT1A6P19224 532 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 UGT1A1P22309 533 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 UGT1A4P22310 534 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 UGT1A3P35503 534 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 NFKB2Q00653 900 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 VMACQ2NL98 169 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 RAB12Q6IQ22 244 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 PAMR1Q6UXH9 720 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 ZNF517Q6ZMY9 492 aaPredicted RBP13.92□□□□□ -0.18
LMX1B-202ENST00000373474 TMC8Q8IU68 726 aa13.92□□□□□ -0.18
LMX1B-202ENST00000373474 CHST4Q8NCG5 386 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms