RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 ARL6IP6Q8N6S5 226 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 CCNYQ8ND76 341 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 EDEM1Q92611 657 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 BTBD2Q9BX70 525 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 ZNF717Q9BY31 904 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-204ENST00000369530 SLC6A17Q9H1V8 727 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 FAM96AQ9H5X1 160 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 MRGBPQ9NV56 204 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 SMOXQ9NWM0 555 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 PAK1IP1Q9NWT1 392 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-204ENST00000369530 SIRT5Q9NXA8 310 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 ARMCX1Q9P291 453 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 MAGED2Q9UNF1 606 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-204ENST00000369530 DIMT1Q9UNQ2 313 aaKnown RBP6.72□□□□□ -1.33
CSDE1-204ENST00000369530 PCDHGA10Q9Y5H3 936 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 ACTL7AQ9Y615 435 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 CACNG2Q9Y698 323 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 CUL9Q8IWT3 2517 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 PRR5-ARHGAP8B1AHC4 643 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 BCAS2O75934 225 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-204ENST00000369530 NDST3O95803 873 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 BCL10O95999 233 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 GOT1P17174 413 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 CA5AP35218 305 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 ARCN1P48444 511 aaKnown RBP6.72□□□□□ -1.33
CSDE1-204ENST00000369530 SLC9A3P48764 834 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 TBX4P57082 545 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 ARHGAP8P85298 464 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 TMPRSS15P98073 1019 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 RIN1Q13671 783 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 PDE1CQ14123 709 aaPredicted RBP6.72□□□□□ -1.33
CSDE1-204ENST00000369530 C4orf46Q504U0 113 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 PIGGQ5H8A4 983 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 FAXCQ5TGI0 409 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 DSG4Q86SJ6 1040 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 CLIP4Q8N3C7 705 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 FAM71DQ8N9W8 422 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 NETO2Q8NC67 525 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 PHF10Q8WUB8 498 aaKnown RBP6.72□□□□□ -1.33
CSDE1-204ENST00000369530 SERPINI1Q99574 410 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 C1QTNF2Q9BXJ5 285 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 CSMD2Q7Z408 3487 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 EXPH5Q8NEV8 1989 aa6.72□□□□□ -1.33
CSDE1-204ENST00000369530 A0A0X1KG70 313 aa6.71□□□□□ -1.33
CSDE1-204ENST00000369530 EXOC1LA0A1B0GW35 172 aa6.71□□□□□ -1.33
CSDE1-204ENST00000369530 ACOT8O14734 319 aa6.71□□□□□ -1.33
CSDE1-204ENST00000369530 LRIG2O94898 1065 aa6.71□□□□□ -1.33
CSDE1-204ENST00000369530 SERPINF2P08697 491 aa6.71□□□□□ -1.33
CSDE1-204ENST00000369530 EVI2BP34910 448 aa6.71□□□□□ -1.33
CSDE1-204ENST00000369530 AVPR1AP37288 418 aa6.71□□□□□ -1.33
CSDE1-204ENST00000369530 PRIM2P49643 509 aa6.71□□□□□ -1.33
CSDE1-204ENST00000369530 AP1S2P56377 157 aa6.71□□□□□ -1.33
CSDE1-204ENST00000369530 ZNF181Q2M3W8 571 aa6.71□□□□□ -1.33
CSDE1-204ENST00000369530 GTDC1Q4AE62 458 aa6.71□□□□□ -1.33
CSDE1-204ENST00000369530 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.71□□□□□ -1.33
CSDE1-204ENST00000369530 CASC4Q6P4E1 433 aa6.71□□□□□ -1.33
CSDE1-204ENST00000369530 DRICH1Q6PGQ1 229 aaPredicted RBP6.71□□□□□ -1.33
CSDE1-204ENST00000369530 ERMP1Q7Z2K6 904 aa6.71□□□□□ -1.33
CSDE1-204ENST00000369530 SCN4BQ8IWT1 228 aa6.71□□□□□ -1.33
CSDE1-204ENST00000369530 PALM2Q8IXS6 379 aa6.71□□□□□ -1.33
CSDE1-204ENST00000369530 KIAA2013Q8IYS2 634 aa6.71□□□□□ -1.33
CSDE1-204ENST00000369530 KATNAL2Q8IYT4 538 aa6.71□□□□□ -1.33
CSDE1-204ENST00000369530 PELI3Q8N2H9 469 aa6.71□□□□□ -1.33
CSDE1-204ENST00000369530 HJURPQ8NCD3 748 aaPredicted RBP6.71□□□□□ -1.33
CSDE1-204ENST00000369530 ADAM32Q8TC27 787 aa6.71□□□□□ -1.33
CSDE1-204ENST00000369530 CMTM5Q96DZ9 223 aa6.71□□□□□ -1.33
CSDE1-204ENST00000369530 DCUN1D5Q9BTE7 237 aa6.71□□□□□ -1.33
CSDE1-204ENST00000369530 TM9SF3Q9HD45 589 aa6.71□□□□□ -1.33
CSDE1-204ENST00000369530 DNAJC28Q9NX36 388 aa6.71□□□□□ -1.33
CSDE1-204ENST00000369530 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.71□□□□□ -1.331e-8■□□□□ 9.6
CSDE1-204ENST00000369530 KIF17Q9P2E2 1029 aa6.71□□□□□ -1.33
CSDE1-204ENST00000369530 GULP1Q9UBP9 304 aa6.71□□□□□ -1.33
CSDE1-204ENST00000369530 KLF15Q9UIH9 416 aa6.71□□□□□ -1.33
CSDE1-204ENST00000369530 VPS4AQ9UN37 437 aa6.71□□□□□ -1.33
CSDE1-204ENST00000369530 PCYT1BQ9Y5K3 369 aaPredicted RBP6.71□□□□□ -1.33
CSDE1-204ENST00000369530 PI4KAP42356 2102 aa6.71□□□□□ -1.33
CSDE1-204ENST00000369530 LINC00862A6NCI5 91 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 DLGAP1O14490 977 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 KCNK2O95069 426 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 C1QAP02745 245 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 CSRP1P21291 193 aaKnown RBP6.71□□□□□ -1.34
CSDE1-204ENST00000369530 NR4A1P22736 598 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 CSKP41240 450 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 MAGEA6P43360 314 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 DGKGP49619 791 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 GNA12Q03113 381 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 PDIA2Q13087 525 aaKnown RBP6.71□□□□□ -1.34
CSDE1-204ENST00000369530 INTS11Q5TA45 600 aaKnown RBP6.71□□□□□ -1.34
CSDE1-204ENST00000369530 NEK5Q6P3R8 708 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 PCSK4Q6UW60 755 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 RFX8Q6ZV50 586 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 CTAGE3PQ8IX95 158 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 CDH26Q8IXH8 852 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 FAM181AQ8N9Y4 354 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 TCP10LQ8TDR4 215 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 SAP25Q8TEE9 199 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 DCAKDQ8WVC6 231 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 BMFQ96LC9 184 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 UBXN10Q96LJ8 280 aa6.71□□□□□ -1.34
CSDE1-204ENST00000369530 ZNF599Q96NL3 588 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms