RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 EEF1B2P24534 225 aaKnown RBP21.11■□□□□ 0.97
SH2D3A-201ENST00000245908 C16orf72Q14CZ0 275 aa21.11■□□□□ 0.97
SH2D3A-201ENST00000245908 CPSF6Q16630 551 aaKnown RBP eCLIP21.11■□□□□ 0.97
SH2D3A-201ENST00000245908 GGTA1PQ4G0N0 100 aa21.11■□□□□ 0.97
SH2D3A-201ENST00000245908 GCNT7Q6ZNI0 430 aa21.11■□□□□ 0.97
SH2D3A-201ENST00000245908 TPRG1Q6ZUI0 275 aa21.11■□□□□ 0.97
SH2D3A-201ENST00000245908 LRRC70Q7Z2Q7 622 aa21.11■□□□□ 0.97
SH2D3A-201ENST00000245908 PHACTR4Q8IZ21 702 aa21.11■□□□□ 0.97
SH2D3A-201ENST00000245908 MTFMTQ96DP5 389 aaKnown RBP21.11■□□□□ 0.97
SH2D3A-201ENST00000245908 COX4I2Q96KJ9 171 aa21.11■□□□□ 0.97
SH2D3A-201ENST00000245908 RBM4BQ9BQ04 359 aaKnown RBP21.11■□□□□ 0.97
SH2D3A-201ENST00000245908 HERC2P3Q9BVR0 1158 aa21.11■□□□□ 0.97
SH2D3A-201ENST00000245908 RBM4Q9BWF3 364 aaKnown RBP21.11■□□□□ 0.97
SH2D3A-201ENST00000245908 SERHLQ9NQF3 203 aa21.11■□□□□ 0.97
SH2D3A-201ENST00000245908 ARL15Q9NXU5 204 aa21.11■□□□□ 0.97
SH2D3A-201ENST00000245908 KIAA1522Q9P206 1035 aaPredicted RBP21.11■□□□□ 0.97
SH2D3A-201ENST00000245908 PDE10AQ9Y233 779 aa21.11■□□□□ 0.97
SH2D3A-201ENST00000245908 DLGAP4Q9Y2H0 992 aa21.11■□□□□ 0.97
SH2D3A-201ENST00000245908 ABCB7O75027 752 aa21.11■□□□□ 0.97
SH2D3A-201ENST00000245908 HOXB9P17482 250 aaPredicted RBP21.11■□□□□ 0.97
SH2D3A-201ENST00000245908 CRHBPP24387 322 aa21.11■□□□□ 0.97
SH2D3A-201ENST00000245908 B4GALNT1Q00973 533 aa21.11■□□□□ 0.97
SH2D3A-201ENST00000245908 PLEKHG6Q3KR16 790 aa21.11■□□□□ 0.97
SH2D3A-201ENST00000245908 ELMSAN1Q6PJG2 1045 aa21.11■□□□□ 0.97
SH2D3A-201ENST00000245908 CPXM2Q8N436 756 aa21.11■□□□□ 0.97
SH2D3A-201ENST00000245908 POP5Q969H6 163 aaKnown RBP21.11■□□□□ 0.97
SH2D3A-201ENST00000245908 FANCEQ9HB96 536 aa21.11■□□□□ 0.97
SH2D3A-201ENST00000245908 PARVBQ9HBI1 364 aa21.11■□□□□ 0.97
SH2D3A-201ENST00000245908 KCNE1BA0A087WTH5 132 aa21.1■□□□□ 0.97
SH2D3A-201ENST00000245908 A0A1W2PPW3 197 aa21.1■□□□□ 0.97
SH2D3A-201ENST00000245908 SERPINB7O75635 380 aa21.1■□□□□ 0.97
SH2D3A-201ENST00000245908 SEC14L2O76054 403 aa21.1■□□□□ 0.97
SH2D3A-201ENST00000245908 PRPS2P11908 318 aa21.1■□□□□ 0.97
SH2D3A-201ENST00000245908 CCR7P32248 378 aa21.1■□□□□ 0.97
SH2D3A-201ENST00000245908 CD70P32970 193 aa21.1■□□□□ 0.97
SH2D3A-201ENST00000245908 CCL23P55773 120 aa21.1■□□□□ 0.97
SH2D3A-201ENST00000245908 RELAQ04206 551 aa21.1■□□□□ 0.97
SH2D3A-201ENST00000245908 LAPTM5Q13571 262 aa21.1■□□□□ 0.97
SH2D3A-201ENST00000245908 MPP7Q5T2T1 576 aa21.1■□□□□ 0.97
SH2D3A-201ENST00000245908 ZNF555Q8NEP9 628 aa21.1■□□□□ 0.97
SH2D3A-201ENST00000245908 NCLNQ969V3 563 aa21.1■□□□□ 0.97
SH2D3A-201ENST00000245908 COPS8Q99627 209 aa21.1■□□□□ 0.97
SH2D3A-201ENST00000245908 AMBRA1Q9C0C7 1298 aa21.1■□□□□ 0.97
SH2D3A-201ENST00000245908 TBC1D23Q9NUY8 699 aa21.1■□□□□ 0.97
SH2D3A-201ENST00000245908 INTS6Q9UL03 887 aaKnown RBP21.1■□□□□ 0.97
SH2D3A-201ENST00000245908 GNGT2O14610 69 aa21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 HOXB6P17509 224 aaKnown RBP21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 PRPH2P23942 346 aa21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 S100A3P33764 101 aa21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 NOGQ13253 232 aa21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 TUBA3CQ13748 450 aa21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 LRRC66Q68CR7 880 aa21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 XAF1Q6GPH4 301 aa21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 ADHFE1Q8IWW8 467 aa21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 HS3ST5Q8IZT8 346 aa21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 FAM9CQ8IZT9 166 aa21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 TCAIMQ8N3R3 496 aa21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 ZCCHC7Q8N3Z6 543 aaKnown RBP21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 OR5K1Q8NHB7 308 aa21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 FIBINQ8TAL6 211 aa21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 SELENOMQ8WWX9 145 aa21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 FAM120BQ96EK7 910 aaKnown RBP21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 SCRN2Q96FV2 425 aa21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 PPIL1Q9Y3C6 166 aa21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 IGLV3-16A0A075B6K0 115 aa21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 C16orf96A6NNT2 1141 aa21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 NOL3O60936 208 aaKnown RBP21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 TMBIM6P55061 237 aa21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 SEMG2Q02383 582 aa21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 GBX1Q14549 363 aa21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 SKIV2LQ15477 1246 aaKnown RBP21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 ATP13A5Q4VNC0 1218 aa21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 MPPE1Q53F39 396 aa21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 FGD3Q5JSP0 725 aa21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 HTR3DQ70Z44 454 aa21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 UBE2R2Q712K3 238 aaPredicted RBP21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 R3HCC1LQ7Z5L2 792 aaKnown RBP21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 SLC39A11Q8N1S5 342 aa21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 TMEM132CQ8N3T6 1108 aa21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 ECHDC3Q96DC8 303 aa21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 THAP11Q96EK4 314 aa21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 ITCHQ96J02 903 aa21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 SLC12A9Q9BXP2 914 aa21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 RMND5AQ9H871 391 aa21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 MRPL17Q9NRX2 175 aaKnown RBP21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 SNX6Q9UNH7 406 aa21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 PCDHGA8Q9Y5G5 932 aa21.09■□□□□ 0.97
SH2D3A-201ENST00000245908 NOBOXO60393 691 aa21.08■□□□□ 0.97
SH2D3A-201ENST00000245908 PQBP1O60828 265 aaKnown RBP21.08■□□□□ 0.97
SH2D3A-201ENST00000245908 E2F6O75461 281 aa21.08■□□□□ 0.97
SH2D3A-201ENST00000245908 MATN1P21941 496 aa21.08■□□□□ 0.97
SH2D3A-201ENST00000245908 PIGAP37287 484 aa21.08■□□□□ 0.97
SH2D3A-201ENST00000245908 ZXDCQ2QGD7 858 aaPredicted RBP21.08■□□□□ 0.97
SH2D3A-201ENST00000245908 SPESP1Q6UW49 350 aa21.08■□□□□ 0.97
SH2D3A-201ENST00000245908 BBS7Q8IWZ6 715 aa21.08■□□□□ 0.97
SH2D3A-201ENST00000245908 EID3Q8N140 333 aa21.08■□□□□ 0.97
SH2D3A-201ENST00000245908 C10orf111Q8N326 155 aa21.08■□□□□ 0.97
SH2D3A-201ENST00000245908 CHDHQ8NE62 594 aaPredicted RBP21.08■□□□□ 0.97
SH2D3A-201ENST00000245908 TESCQ96BS2 214 aa21.08■□□□□ 0.97
SH2D3A-201ENST00000245908 ASIC4Q96FT7 647 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms