RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 CDC7O00311 574 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 MATN4O95460 622 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 CLDN7O95471 211 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 XRCC1P18887 633 aaPredicted RBP11.28□□□□□ -0.6
NOD1-201ENST00000222823 NR4A1P22736 598 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 ACTR1BP42025 376 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 OMPP47874 163 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 CCNHP51946 323 aaPredicted RBP11.28□□□□□ -0.6
NOD1-201ENST00000222823 SEC13P55735 322 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 ACTR1AP61163 376 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 LIN54Q6MZP7 749 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 PIM3Q86V86 326 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 ZNF366Q8N895 744 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 OR10H5Q8NGA6 315 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 CANT1Q8WVQ1 401 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 C16orf70Q9BSU1 422 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 EBF3Q9H4W6 596 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 ZDHHC2Q9UIJ5 367 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 NDRG2Q9UN36 371 aaKnown RBP11.28□□□□□ -0.6
NOD1-201ENST00000222823 KCTD3Q9Y597 815 aa11.28□□□□□ -0.6
NOD1-201ENST00000222823 A0A1W2PRB8 838 aa11.27□□□□□ -0.6
NOD1-201ENST00000222823 MTMR11A4FU01 709 aa11.27□□□□□ -0.6
NOD1-201ENST00000222823 CBFA2T3O75081 653 aa11.27□□□□□ -0.6
NOD1-201ENST00000222823 IGFALSP35858 605 aa11.27□□□□□ -0.6
NOD1-201ENST00000222823 TNFAIP8L2Q6P589 184 aaPredicted RBP11.27□□□□□ -0.6
NOD1-201ENST00000222823 FAM129CQ86XR2 697 aa11.27□□□□□ -0.6
NOD1-201ENST00000222823 ENDOVQ8N8Q3 282 aaKnown RBP11.27□□□□□ -0.6
NOD1-201ENST00000222823 IL12RB2Q99665 862 aa11.27□□□□□ -0.6
NOD1-201ENST00000222823 IRAK3Q9Y616 596 aa11.27□□□□□ -0.6
NOD1-201ENST00000222823 OAS3Q9Y6K5 1087 aaKnown RBP11.27□□□□□ -0.6
NOD1-201ENST00000222823 TLL2Q9Y6L7 1015 aa11.27□□□□□ -0.6
NOD1-201ENST00000222823 FAM92AA1XBS5 289 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 TFECO14948 347 aaPredicted RBP11.27□□□□□ -0.61
NOD1-201ENST00000222823 RFPL1O75677 317 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 CCNB2O95067 398 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 CCR10P46092 362 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 EEFSECP57772 596 aaKnown RBP11.27□□□□□ -0.61
NOD1-201ENST00000222823 RAPSNQ13702 412 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 FRG2Q64ET8 278 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 TPRG1Q6ZUI0 275 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 LRRC58Q96CX6 371 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 FRG2BQ96QU4 278 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 FEM1AQ9BSK4 669 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 MKS1Q9NXB0 559 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 DNAJB4Q9UDY4 337 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 A0A0G2JN53 185 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 EI24O14681 340 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 GADD45GO95257 159 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 EPOP01588 193 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 MYCLP1P12525 358 aaPredicted RBP11.27□□□□□ -0.61
NOD1-201ENST00000222823 ACP5P13686 325 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 IL7RP16871 459 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 MAGP20916 626 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 SLBPQ14493 270 aaKnown RBP eCLIP11.27□□□□□ -0.61
NOD1-201ENST00000222823 FAM91A1Q658Y4 838 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 PLET1Q6UQ28 207 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 ATG14Q6ZNE5 492 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 CEP68Q76N32 757 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 MMAAQ8IVH4 418 aaKnown RBP11.27□□□□□ -0.61
NOD1-201ENST00000222823 CGREF1Q99674 301 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 KIFC1Q9BW19 673 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 TDP1Q9NUW8 608 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 SLC22A14Q9Y267 594 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 PSAT1Q9Y617 370 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 KNL1Q8NG31 2342 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 WWP2O00308 870 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 PDPK1O15530 556 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 TGFB1P01137 390 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 HAPLN1P10915 354 aaPredicted RBP11.27□□□□□ -0.61
NOD1-201ENST00000222823 MTHFD1P11586 935 aaKnown RBP11.27□□□□□ -0.61
NOD1-201ENST00000222823 CPN2P22792 545 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 GGT5P36269 586 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 NDUFA5Q16718 116 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 HKDC1Q2TB90 917 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 FRMD7Q6ZUT3 714 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 P2RY8Q86VZ1 359 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 SLC7A6OSQ96CW6 309 aaPredicted RBP11.27□□□□□ -0.61
NOD1-201ENST00000222823 ASB9Q96DX5 294 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 SLC35G5Q96KT7 338 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 CHCHD6Q9BRQ6 235 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 ZSCAN5AQ9BUG6 496 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 TRIM8Q9BZR9 551 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 LRRC42Q9Y546 428 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 DGKBQ9Y6T7 804 aa11.27□□□□□ -0.61
NOD1-201ENST00000222823 THSD7AQ9UPZ6 1657 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 LCHNA4D1U4 455 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 SSNA1O43805 119 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 PLOD3O60568 738 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 PTX3P26022 381 aaPredicted RBP11.26□□□□□ -0.61
NOD1-201ENST00000222823 CCND3P30281 292 aaPredicted RBP11.26□□□□□ -0.61
NOD1-201ENST00000222823 MAGEA11P43364 429 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 RPS6KA3P51812 740 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 STC1P52823 247 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 DGKQP52824 942 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 CNKSR3Q6P9H4 555 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 PIGXQ8TBF5 258 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 METTL21AQ8WXB1 218 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 RTP4Q96DX8 246 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 NUS1Q96E22 293 aa11.26□□□□□ -0.61
NOD1-201ENST00000222823 OMA1Q96E52 524 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms