RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 PLSCR1O15162 318 aa13□□□□□ -0.33
PMF1-204ENST00000466489 PNISRQ8TF01 805 aaKnown RBP13□□□□□ -0.33
PMF1-204ENST00000466489 PLEKHF1Q96S99 279 aa13□□□□□ -0.33
PMF1-204ENST00000466489 RNMTO43148 476 aaKnown RBP12.99□□□□□ -0.33
PMF1-204ENST00000466489 CCDC146Q8IYE0 955 aa12.99□□□□□ -0.33
PMF1-204ENST00000466489 MRC1P22897 1456 aa12.98□□□□□ -0.33
PMF1-204ENST00000466489 RIPK4P57078 832 aa12.98□□□□□ -0.33
PMF1-204ENST00000466489 EN1Q05925 392 aaPredicted RBP12.98□□□□□ -0.33
PMF1-204ENST00000466489 CCDC184Q52MB2 194 aa12.98□□□□□ -0.33
PMF1-204ENST00000466489 DEFB132Q7Z7B7 95 aa12.98□□□□□ -0.33
PMF1-204ENST00000466489 FAM9BQ8IZU0 186 aa12.98□□□□□ -0.33
PMF1-204ENST00000466489 SLC52A2Q9HAB3 445 aa12.98□□□□□ -0.33
PMF1-204ENST00000466489 LY75O60449 1722 aa12.98□□□□□ -0.33
PMF1-204ENST00000466489 RREB1Q92766 1687 aa12.98□□□□□ -0.33
PMF1-204ENST00000466489 TMPOP42166 694 aaKnown RBP12.97□□□□□ -0.33
PMF1-204ENST00000466489 SLC27A3Q5K4L6 730 aa12.97□□□□□ -0.33
PMF1-204ENST00000466489 TTC5Q8N0Z6 440 aa12.97□□□□□ -0.33
PMF1-204ENST00000466489 PIGBQ92521 554 aa12.97□□□□□ -0.33
PMF1-204ENST00000466489 PALLDQ8WX93 1383 aa12.96□□□□□ -0.33
PMF1-204ENST00000466489 CALD1Q05682 793 aaKnown RBP12.96□□□□□ -0.33
PMF1-204ENST00000466489 NEUROD2Q15784 382 aa12.96□□□□□ -0.33
PMF1-204ENST00000466489 NGEFQ8N5V2 710 aa12.96□□□□□ -0.33
PMF1-204ENST00000466489 NFATC2IPQ8NCF5 419 aa12.96□□□□□ -0.33
PMF1-204ENST00000466489 SIPA1L3O60292 1781 aaPredicted RBP12.96□□□□□ -0.34
PMF1-204ENST00000466489 CEMIPQ8WUJ3 1361 aa12.95□□□□□ -0.34
PMF1-204ENST00000466489 RNF123Q5XPI4 1314 aa12.95□□□□□ -0.34
PMF1-204ENST00000466489 EZH2Q15910 746 aaKnown RBP12.95□□□□□ -0.34
PMF1-204ENST00000466489 NBPF14Q5TI25 921 aa12.95□□□□□ -0.34
PMF1-204ENST00000466489 PTF1AQ7RTS3 328 aa12.95□□□□□ -0.34
PMF1-204ENST00000466489 CAMKK2Q96RR4 588 aa12.95□□□□□ -0.34
PMF1-204ENST00000466489 LGR6Q9HBX8 967 aa12.95□□□□□ -0.34
PMF1-204ENST00000466489 NUP188Q5SRE5 1749 aa12.94□□□□□ -0.34
PMF1-204ENST00000466489 TXNRD1Q16881 649 aa12.94□□□□□ -0.34
PMF1-204ENST00000466489 MCM10Q7L590 875 aa12.94□□□□□ -0.34
PMF1-204ENST00000466489 IL17REQ8NFR9 667 aa12.94□□□□□ -0.34
PMF1-204ENST00000466489 CCNL1Q9UK58 526 aaPredicted RBP12.94□□□□□ -0.34
PMF1-204ENST00000466489 C5P01031 1676 aa12.93□□□□□ -0.34
PMF1-204ENST00000466489 PAPPAQ13219 1627 aa12.93□□□□□ -0.34
PMF1-204ENST00000466489 BTBD11A6QL63 1104 aa12.93□□□□□ -0.34
PMF1-204ENST00000466489 APAF1O14727 1248 aa12.93□□□□□ -0.34
PMF1-204ENST00000466489 RRP7AQ9Y3A4 280 aaKnown RBP12.93□□□□□ -0.34
PMF1-204ENST00000466489 ZNF831Q5JPB2 1677 aa12.93□□□□□ -0.34
PMF1-204ENST00000466489 TAF7Q15545 349 aaPredicted RBP12.92□□□□□ -0.34
PMF1-204ENST00000466489 RBM42Q9BTD8 480 aaKnown RBP12.92□□□□□ -0.34
PMF1-204ENST00000466489 ATG3Q9NT62 314 aa12.92□□□□□ -0.34
PMF1-204ENST00000466489 ASAP1Q9ULH1 1129 aa12.92□□□□□ -0.34
PMF1-204ENST00000466489 TAF1LQ8IZX4 1826 aa12.92□□□□□ -0.34
PMF1-204ENST00000466489 LOC102724428A0A0B4J2F2 783 aa12.91□□□□□ -0.34
PMF1-204ENST00000466489 SIK1P57059 783 aa12.91□□□□□ -0.34
PMF1-204ENST00000466489 DCTN1Q14203 1278 aa12.91□□□□□ -0.34
PMF1-204ENST00000466489 NCBP3Q53F19 620 aaKnown RBP12.91□□□□□ -0.34
PMF1-204ENST00000466489 UBR2Q8IWV8 1755 aa12.91□□□□□ -0.34
PMF1-204ENST00000466489 ATP6V1AP38606 617 aa12.9□□□□□ -0.34
PMF1-204ENST00000466489 STK32BQ9NY57 414 aa12.9□□□□□ -0.34
PMF1-204ENST00000466489 KDM3BQ7LBC6 1761 aa12.89□□□□□ -0.35
PMF1-204ENST00000466489 PTCD1O75127 700 aaKnown RBP12.89□□□□□ -0.35
PMF1-204ENST00000466489 ZNF790Q6PG37 636 aa12.89□□□□□ -0.35
PMF1-204ENST00000466489 CCDC136Q96JN2 1154 aa12.89□□□□□ -0.35
PMF1-204ENST00000466489 FMNL2Q96PY5 1086 aa12.89□□□□□ -0.35
PMF1-204ENST00000466489 BABAM1Q9NWV8 329 aa12.89□□□□□ -0.35
PMF1-204ENST00000466489 CICQ96RK0 1608 aaPredicted RBP12.88□□□□□ -0.35
PMF1-204ENST00000466489 SLC39A6Q13433 755 aa12.88□□□□□ -0.35
PMF1-204ENST00000466489 CCDC27Q2M243 656 aa12.88□□□□□ -0.35
PMF1-204ENST00000466489 VSIG10Q8N0Z9 540 aa12.88□□□□□ -0.35
PMF1-204ENST00000466489 TEX13AQ9BXU3 409 aaPredicted RBP12.88□□□□□ -0.35
PMF1-204ENST00000466489 TSPYL4Q9UJ04 414 aa12.88□□□□□ -0.35
PMF1-204ENST00000466489 MS4A1P11836 297 aa12.87□□□□□ -0.35
PMF1-204ENST00000466489 ANP32AP39687 249 aaKnown RBP12.87□□□□□ -0.35
PMF1-204ENST00000466489 AK7Q96M32 723 aa12.87□□□□□ -0.35
PMF1-204ENST00000466489 THUMPD2Q9BTF0 503 aaKnown RBP12.87□□□□□ -0.35
PMF1-204ENST00000466489 TRIM35Q9UPQ4 493 aa12.87□□□□□ -0.35
PMF1-204ENST00000466489 LAS1LQ9Y4W2 734 aaKnown RBP12.87□□□□□ -0.35
PMF1-204ENST00000466489 C4BP0C0L5 1744 aa12.87□□□□□ -0.35
PMF1-204ENST00000466489 COL5A3P25940 1745 aaPredicted RBP12.87□□□□□ -0.35
PMF1-204ENST00000466489 QSER1Q2KHR3 1735 aa12.86□□□□□ -0.35
PMF1-204ENST00000466489 STARD3NLO95772 234 aa12.86□□□□□ -0.35
PMF1-204ENST00000466489 GNAI1P63096 354 aa12.86□□□□□ -0.35
PMF1-204ENST00000466489 PROM2Q8N271 834 aa12.86□□□□□ -0.35
PMF1-204ENST00000466489 KCPQ6ZWJ8 1503 aa12.86□□□□□ -0.35
PMF1-204ENST00000466489 TJP1Q07157 1748 aa12.85□□□□□ -0.35
PMF1-204ENST00000466489 HEG1Q9ULI3 1381 aa12.85□□□□□ -0.35
PMF1-204ENST00000466489 TCERG1O14776 1098 aaKnown RBP12.85□□□□□ -0.35
PMF1-204ENST00000466489 SLC15A2Q16348 729 aa12.85□□□□□ -0.35
PMF1-204ENST00000466489 NPM2Q86SE8 214 aaKnown RBP12.85□□□□□ -0.35
PMF1-204ENST00000466489 CFAP44Q96MT7 982 aa12.85□□□□□ -0.35
PMF1-204ENST00000466489 LRRC4BQ9NT99 713 aa12.85□□□□□ -0.35
PMF1-204ENST00000466489 IFT57Q9NWB7 429 aa12.85□□□□□ -0.35
PMF1-204ENST00000466489 TFCP2L1Q9NZI6 479 aa12.85□□□□□ -0.35
PMF1-204ENST00000466489 LAMB4A4D0S4 1761 aa12.84□□□□□ -0.35
PMF1-204ENST00000466489 WWC1Q8IX03 1113 aa12.84□□□□□ -0.35
PMF1-204ENST00000466489 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.84□□□□□ -0.35
PMF1-204ENST00000466489 FLAD1Q8NFF5 587 aa12.84□□□□□ -0.35
PMF1-204ENST00000466489 ZNF496Q96IT1 587 aaPredicted RBP12.84□□□□□ -0.35
PMF1-204ENST00000466489 SALL2Q9Y467 1007 aaPredicted RBP12.84□□□□□ -0.35
PMF1-204ENST00000466489 IL16Q14005 1332 aa12.84□□□□□ -0.35
PMF1-204ENST00000466489 SNRPA1P09661 255 aaKnown RBP12.83□□□□□ -0.36
PMF1-204ENST00000466489 KCNQ4P56696 695 aa12.83□□□□□ -0.36
PMF1-204ENST00000466489 WDR63Q8IWG1 891 aa12.83□□□□□ -0.36
PMF1-204ENST00000466489 CHMP4AQ9BY43 222 aa12.83□□□□□ -0.36
PMF1-204ENST00000466489 CNTNAP4Q9C0A0 1308 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms