RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 ANKRD1Q15327 319 aa8.51□□□□□ -1.05
BEST1-202ENST00000449131 TSR1Q2NL82 804 aaKnown RBP8.51□□□□□ -1.05
BEST1-202ENST00000449131 KCNH5Q8NCM2 988 aa8.51□□□□□ -1.05
BEST1-202ENST00000449131 ARHGAP45Q92619 1136 aa8.51□□□□□ -1.05
BEST1-202ENST00000449131 MEIS3Q99687 375 aa8.51□□□□□ -1.05
BEST1-202ENST00000449131 PHF8Q9UPP1 1060 aa8.51□□□□□ -1.05
BEST1-202ENST00000449131 ADGRL2O95490 1459 aa8.51□□□□□ -1.05
BEST1-202ENST00000449131 FERMT3Q86UX7 667 aa8.51□□□□□ -1.05
BEST1-202ENST00000449131 TSPYL6Q8N831 410 aa8.51□□□□□ -1.05
BEST1-202ENST00000449131 TBC1D2BQ9UPU7 963 aa8.51□□□□□ -1.05
BEST1-202ENST00000449131 GCC2Q8IWJ2 1684 aa8.51□□□□□ -1.05
BEST1-202ENST00000449131 RAB11FIP3O75154 756 aa8.51□□□□□ -1.05
BEST1-202ENST00000449131 CCDC158Q5M9N0 1113 aa8.51□□□□□ -1.05
BEST1-202ENST00000449131 DNAAF4Q8WXU2 420 aa8.51□□□□□ -1.05
BEST1-202ENST00000449131 PHACTR3Q96KR7 559 aa8.51□□□□□ -1.05
BEST1-202ENST00000449131 BOLA2Q9H3K6 86 aa8.51□□□□□ -1.05
BEST1-202ENST00000449131 HOOK1Q9UJC3 728 aaKnown RBP8.51□□□□□ -1.05
BEST1-202ENST00000449131 SPATA31E1Q6ZUB1 1445 aa8.5□□□□□ -1.05
BEST1-202ENST00000449131 UQCRHLA0A096LP55 91 aa8.5□□□□□ -1.05
BEST1-202ENST00000449131 UQCRHP07919 91 aa8.5□□□□□ -1.05
BEST1-202ENST00000449131 CCDC192P0DO97 292 aa8.5□□□□□ -1.05
BEST1-202ENST00000449131 FKBP4Q02790 459 aaKnown RBP eCLIP8.5□□□□□ -1.05
BEST1-202ENST00000449131 PRPF40BQ6NWY9 871 aaKnown RBP8.5□□□□□ -1.05
BEST1-202ENST00000449131 CCDC83Q8IWF9 413 aa8.5□□□□□ -1.05
BEST1-202ENST00000449131 ZSCAN31Q96LW9 406 aaPredicted RBP8.5□□□□□ -1.05
BEST1-202ENST00000449131 PRDM11Q9NQV5 511 aa8.5□□□□□ -1.05
BEST1-202ENST00000449131 STK38Q15208 465 aa8.5□□□□□ -1.05
BEST1-202ENST00000449131 TTC39AQ5SRH9 613 aa8.5□□□□□ -1.05
BEST1-202ENST00000449131 TTC22Q5TAA0 569 aa8.5□□□□□ -1.05
BEST1-202ENST00000449131 VPS53Q5VIR6 699 aa8.5□□□□□ -1.05
BEST1-202ENST00000449131 KIF6Q6ZMV9 814 aa8.5□□□□□ -1.05
BEST1-202ENST00000449131 MRPL50Q8N5N7 158 aaKnown RBP8.5□□□□□ -1.05
BEST1-202ENST00000449131 CCDC85AQ96PX6 553 aaPredicted RBP8.5□□□□□ -1.05
BEST1-202ENST00000449131 CNNM1Q9NRU3 951 aa8.5□□□□□ -1.05
BEST1-202ENST00000449131 ANXA1P04083 346 aa8.5□□□□□ -1.05
BEST1-202ENST00000449131 RRP12Q5JTH9 1297 aaKnown RBP8.5□□□□□ -1.05
BEST1-202ENST00000449131 ZNF830Q96NB3 372 aaPredicted RBP8.5□□□□□ -1.05
BEST1-202ENST00000449131 NOL10Q9BSC4 688 aaKnown RBP8.5□□□□□ -1.05
BEST1-202ENST00000449131 NAT10Q9H0A0 1025 aaKnown RBP8.5□□□□□ -1.05
BEST1-202ENST00000449131 CCDC8Q9H0W5 538 aaPredicted RBP8.5□□□□□ -1.05
BEST1-202ENST00000449131 TNMDQ9H2S6 317 aa8.5□□□□□ -1.05
BEST1-202ENST00000449131 ZCCHC11Q5TAX3 1644 aaKnown RBP8.5□□□□□ -1.05
BEST1-202ENST00000449131 PPFIA3O75145 1194 aa8.49□□□□□ -1.05
BEST1-202ENST00000449131 VAMP4O75379 141 aa8.49□□□□□ -1.05
BEST1-202ENST00000449131 CEP126Q9P2H0 1117 aa8.49□□□□□ -1.05
BEST1-202ENST00000449131 TTC21BQ7Z4L5 1316 aa8.49□□□□□ -1.05
BEST1-202ENST00000449131 RRP9O43818 475 aaKnown RBP8.49□□□□□ -1.05
BEST1-202ENST00000449131 DHX16O60231 1041 aaKnown RBP8.49□□□□□ -1.05
BEST1-202ENST00000449131 CCDC57Q2TAC2 916 aa8.49□□□□□ -1.05
BEST1-202ENST00000449131 KCTD17Q8N5Z5 321 aa8.49□□□□□ -1.05
BEST1-202ENST00000449131 EIF2AK4Q9P2K8 1649 aaKnown RBP8.49□□□□□ -1.05
BEST1-202ENST00000449131 POGZQ7Z3K3 1410 aa8.49□□□□□ -1.05
BEST1-202ENST00000449131 BAG4O95429 457 aaKnown RBP8.49□□□□□ -1.05
BEST1-202ENST00000449131 SDSP20132 328 aa8.49□□□□□ -1.05
BEST1-202ENST00000449131 ME1P48163 572 aa8.49□□□□□ -1.05
BEST1-202ENST00000449131 AMOTL1Q8IY63 956 aa8.49□□□□□ -1.05
BEST1-202ENST00000449131 STK11IPQ8N1F8 1099 aa8.49□□□□□ -1.05
BEST1-202ENST00000449131 DDX11Q96FC9 970 aa8.49□□□□□ -1.05
BEST1-202ENST00000449131 CHAMP1Q96JM3 812 aa8.49□□□□□ -1.05
BEST1-202ENST00000449131 ZNF396Q96N95 335 aaPredicted RBP8.49□□□□□ -1.05
BEST1-202ENST00000449131 ZSCAN30Q86W11 494 aa8.49□□□□□ -1.05
BEST1-202ENST00000449131 SPATA32Q96LK8 384 aa8.49□□□□□ -1.05
BEST1-202ENST00000449131 PUS7Q96PZ0 661 aaKnown RBP8.49□□□□□ -1.05
BEST1-202ENST00000449131 PI4KAP2A4QPH2 592 aa8.48□□□□□ -1.05
BEST1-202ENST00000449131 PTCD1O75127 700 aaKnown RBP8.48□□□□□ -1.05
BEST1-202ENST00000449131 LARP1Q6PKG0 1096 aaKnown RBP8.48□□□□□ -1.05
BEST1-202ENST00000449131 PPP1R42Q7Z4L9 355 aa8.48□□□□□ -1.05
BEST1-202ENST00000449131 PI4KAP1Q8N8J0 262 aa8.48□□□□□ -1.05
BEST1-202ENST00000449131 ZBTB40Q9NUA8 1239 aa8.48□□□□□ -1.05
BEST1-202ENST00000449131 A0A1W2PP64 1363 aa8.48□□□□□ -1.05
BEST1-202ENST00000449131 EIF4A2Q14240 407 aaKnown RBP8.48□□□□□ -1.05
BEST1-202ENST00000449131 ANKRD44Q8N8A2 993 aa8.48□□□□□ -1.05
BEST1-202ENST00000449131 ANKRD20A12PQ8NF67 263 aa8.48□□□□□ -1.05
BEST1-202ENST00000449131 MYD88Q99836 296 aa8.48□□□□□ -1.05
BEST1-202ENST00000449131 DBF4Q9UBU7 674 aaPredicted RBP8.48□□□□□ -1.05
BEST1-202ENST00000449131 MTMR7Q9Y216 660 aa8.48□□□□□ -1.05
BEST1-202ENST00000449131 ECM2O94769 699 aaPredicted RBP8.48□□□□□ -1.05
BEST1-202ENST00000449131 TPM2P07951 284 aa8.48□□□□□ -1.05
BEST1-202ENST00000449131 OLFM4Q6UX06 510 aa8.48□□□□□ -1.05
BEST1-202ENST00000449131 ZNF771Q7L3S4 317 aaPredicted RBP8.48□□□□□ -1.05
BEST1-202ENST00000449131 SMC5Q8IY18 1101 aa8.48□□□□□ -1.05
BEST1-202ENST00000449131 GOLGA6L1Q8N7Z2 621 aa8.48□□□□□ -1.05
BEST1-202ENST00000449131 PCMTD1Q96MG8 357 aaPredicted RBP8.48□□□□□ -1.05
BEST1-202ENST00000449131 NCKAP5LQ9HCH0 1330 aa8.47□□□□□ -1.05
BEST1-202ENST00000449131 ZNF518AQ6AHZ1 1483 aa8.47□□□□□ -1.05
BEST1-202ENST00000449131 SMC2O95347 1197 aa8.47□□□□□ -1.05
BEST1-202ENST00000449131 CAMK4Q16566 473 aa8.47□□□□□ -1.05
BEST1-202ENST00000449131 AMOTQ4VCS5 1084 aa8.47□□□□□ -1.05
BEST1-202ENST00000449131 ZGPATQ8N5A5 531 aaKnown RBP8.47□□□□□ -1.05
BEST1-202ENST00000449131 NOC3LQ8WTT2 800 aaKnown RBP8.47□□□□□ -1.05
BEST1-202ENST00000449131 KRT32Q14532 448 aa8.47□□□□□ -1.05
BEST1-202ENST00000449131 SART3Q15020 963 aaKnown RBP8.47□□□□□ -1.05
BEST1-202ENST00000449131 PDILTQ8N807 584 aa8.47□□□□□ -1.05
BEST1-202ENST00000449131 OTUD7AQ8TE49 926 aaPredicted RBP8.47□□□□□ -1.05
BEST1-202ENST00000449131 NUP62CLQ9H1M0 184 aa8.47□□□□□ -1.05
BEST1-202ENST00000449131 CDC42BPBQ9Y5S2 1711 aa8.46□□□□□ -1.05
BEST1-202ENST00000449131 USP25Q9UHP3 1055 aa8.46□□□□□ -1.05
BEST1-202ENST00000449131 NPC1L1Q9UHC9 1359 aa8.46□□□□□ -1.05
BEST1-202ENST00000449131 PPIP5K1Q6PFW1 1433 aa8.46□□□□□ -1.05
BEST1-202ENST00000449131 MAPK8IP2Q13387 824 aaPredicted RBP8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms