RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 USHBP1Q8N6Y0 703 aa22.21■■□□□ 1.15
SF1-203ENST00000377387 KLHL40Q2TBA0 621 aa22.21■■□□□ 1.15
SF1-203ENST00000377387 NASPP49321 788 aaPredicted RBP22.2■■□□□ 1.15
SF1-203ENST00000377387 IL1RAPL2Q9NP60 686 aa22.2■■□□□ 1.14
SF1-203ENST00000377387 ISY1Q9ULR0 285 aaKnown RBP22.2■■□□□ 1.14
SF1-203ENST00000377387 FOXD4L6Q3SYB3 417 aaPredicted RBP22.2■■□□□ 1.14
SF1-203ENST00000377387 FOXD4L3Q6VB84 417 aaPredicted RBP22.2■■□□□ 1.14
SF1-203ENST00000377387 LRRCC1Q9C099 1032 aa22.2■■□□□ 1.14
SF1-203ENST00000377387 ANO2Q9NQ90 1003 aa22.2■■□□□ 1.14
SF1-203ENST00000377387 RBM27Q9P2N5 1060 aaKnown RBP22.2■■□□□ 1.14
SF1-203ENST00000377387 ZBTB7CA1YPR0 619 aa22.19■■□□□ 1.14
SF1-203ENST00000377387 LRRFIP2Q9Y608 721 aaKnown RBP22.19■■□□□ 1.14
SF1-203ENST00000377387 LMBRD1Q9NUN5 540 aa22.18■■□□□ 1.14
SF1-203ENST00000377387 MAP4K4O95819 1239 aaPredicted RBP22.18■■□□□ 1.14
SF1-203ENST00000377387 PALD1Q9ULE6 856 aa22.17■■□□□ 1.14
SF1-203ENST00000377387 ZDHHC9Q9Y397 364 aa22.17■■□□□ 1.14
SF1-203ENST00000377387 FLT4P35916 1363 aa22.17■■□□□ 1.14
SF1-203ENST00000377387 CCDC30Q5VVM6 783 aa22.17■■□□□ 1.14
SF1-203ENST00000377387 MX1P20591 662 aa22.17■■□□□ 1.14
SF1-203ENST00000377387 USP31Q70CQ4 1352 aa22.16■■□□□ 1.14
SF1-203ENST00000377387 GNAT3A8MTJ3 354 aa22.16■■□□□ 1.14
SF1-203ENST00000377387 KCNA6P17658 529 aa22.16■■□□□ 1.14
SF1-203ENST00000377387 EIF2S2P20042 333 aaKnown RBP22.16■■□□□ 1.14
SF1-203ENST00000377387 UNC5CLQ8IV45 518 aa22.16■■□□□ 1.14
SF1-203ENST00000377387 NRKQ7Z2Y5 1582 aa22.16■■□□□ 1.14
SF1-203ENST00000377387 ARHGEF10O15013 1369 aa22.16■■□□□ 1.14
SF1-203ENST00000377387 PLEKHG1Q9ULL1 1385 aa22.15■■□□□ 1.14
SF1-203ENST00000377387 CYP2E1P05181 493 aaPredicted RBP22.15■■□□□ 1.14
SF1-203ENST00000377387 CLEC17AQ6ZS10 378 aa22.15■■□□□ 1.14
SF1-203ENST00000377387 IL17REQ8NFR9 667 aa22.15■■□□□ 1.14
SF1-203ENST00000377387 UPF3BQ9BZI7 483 aaKnown RBP22.15■■□□□ 1.14
SF1-203ENST00000377387 PHAXQ9H814 394 aaKnown RBP22.15■■□□□ 1.14
SF1-203ENST00000377387 TRHP20396 242 aaPredicted RBP22.15■■□□□ 1.14
SF1-203ENST00000377387 TPRNQ4KMQ1 711 aa22.15■■□□□ 1.14
SF1-203ENST00000377387 NUTM1Q86Y26 1132 aa22.15■■□□□ 1.14
SF1-203ENST00000377387 TMX3Q96JJ7 454 aa22.15■■□□□ 1.14
SF1-203ENST00000377387 ESYT1Q9BSJ8 1104 aa22.15■■□□□ 1.14
SF1-203ENST00000377387 ZSCAN23Q3MJ62 389 aa22.14■■□□□ 1.14
SF1-203ENST00000377387 ANP32BQ92688 251 aaKnown RBP22.14■■□□□ 1.14
SF1-203ENST00000377387 CWC22Q9HCG8 908 aaKnown RBP22.14■■□□□ 1.14
SF1-203ENST00000377387 CEP170BQ9Y4F5 1589 aaPredicted RBP22.14■■□□□ 1.14
SF1-203ENST00000377387 SBNO1A3KN83 1393 aa22.14■■□□□ 1.14
SF1-203ENST00000377387 GNAI3P08754 354 aa22.14■■□□□ 1.13
SF1-203ENST00000377387 ATP8B2P98198 1209 aa22.13■■□□□ 1.13
SF1-203ENST00000377387 ABTB2Q8N961 1025 aa22.13■■□□□ 1.13
SF1-203ENST00000377387 OSBPL3Q9H4L5 887 aa22.13■■□□□ 1.13
SF1-203ENST00000377387 IGSF1Q8N6C5 1336 aa22.13■■□□□ 1.13
SF1-203ENST00000377387 GPT2Q8TD30 523 aa22.12■■□□□ 1.13
SF1-203ENST00000377387 NSFL1CQ9UNZ2 370 aaKnown RBP22.12■■□□□ 1.13
SF1-203ENST00000377387 TTC21AQ8NDW8 1320 aa22.12■■□□□ 1.13
SF1-203ENST00000377387 PRKCSHP14314 528 aaPredicted RBP22.11■■□□□ 1.13
SF1-203ENST00000377387 UBTFL1P0CB47 393 aaPredicted RBP22.11■■□□□ 1.13
SF1-203ENST00000377387 CHMLP26374 656 aa22.11■■□□□ 1.13
SF1-203ENST00000377387 HOXC9P31274 260 aa22.11■■□□□ 1.13
SF1-203ENST00000377387 RGPD8O14715 1765 aaPredicted RBP22.11■■□□□ 1.13
SF1-203ENST00000377387 PRIM1P49642 420 aaKnown RBP22.1■■□□□ 1.13
SF1-203ENST00000377387 HDGFL1Q5TGJ6 251 aa22.1■■□□□ 1.13
SF1-203ENST00000377387 USP44Q9H0E7 712 aa22.1■■□□□ 1.13
SF1-203ENST00000377387 ANXA1P04083 346 aa22.1■■□□□ 1.13
SF1-203ENST00000377387 RBSNQ9H1K0 784 aa22.1■■□□□ 1.13
SF1-203ENST00000377387 IL25Q9H293 177 aa22.1■■□□□ 1.13
SF1-203ENST00000377387 SURF6O75683 361 aaKnown RBP22.09■■□□□ 1.13
SF1-203ENST00000377387 TAF7Q15545 349 aaPredicted RBP22.09■■□□□ 1.13
SF1-203ENST00000377387 SSH2Q76I76 1423 aa22.09■■□□□ 1.13
SF1-203ENST00000377387 MCCP23508 829 aa22.08■■□□□ 1.13
SF1-203ENST00000377387 CCDC173Q0VFZ6 552 aa22.08■■□□□ 1.13
SF1-203ENST00000377387 LARP6Q9BRS8 491 aaKnown RBP22.08■■□□□ 1.13
SF1-203ENST00000377387 KDRP35968 1356 aa22.08■■□□□ 1.12
SF1-203ENST00000377387 SALL3Q9BXA9 1300 aa22.07■■□□□ 1.12
SF1-203ENST00000377387 SETD1BQ9UPS6 1966 aaKnown RBP22.07■■□□□ 1.12
SF1-203ENST00000377387 SYCE3A1L190 88 aa22.07■■□□□ 1.12
SF1-203ENST00000377387 DTNBO60941 627 aa22.07■■□□□ 1.12
SF1-203ENST00000377387 PPP1R42Q7Z4L9 355 aa22.06■■□□□ 1.12
SF1-203ENST00000377387 GDPD2Q9HCC8 539 aa22.06■■□□□ 1.12
SF1-203ENST00000377387 TMEM63CQ9P1W3 806 aa22.06■■□□□ 1.12
SF1-203ENST00000377387 RGPD1P0DJD0 1748 aa22.06■■□□□ 1.12
SF1-203ENST00000377387 IBTKQ9P2D0 1353 aaPredicted RBP22.06■■□□□ 1.12
SF1-203ENST00000377387 XPCQ01831 940 aaPredicted RBP22.06■■□□□ 1.12
SF1-203ENST00000377387 TBX22Q9Y458 520 aa22.05■■□□□ 1.12
SF1-203ENST00000377387 ZNF445P59923 1031 aa22.05■■□□□ 1.12
SF1-203ENST00000377387 THEMISQ8N1K5 641 aaPredicted RBP22.05■■□□□ 1.12
SF1-203ENST00000377387 RNF214Q8ND24 703 aa22.05■■□□□ 1.12
SF1-203ENST00000377387 LGR6Q9HBX8 967 aa22.04■■□□□ 1.12
SF1-203ENST00000377387 SRGAP3O43295 1099 aa22.03■■□□□ 1.12
SF1-203ENST00000377387 KCNQ3O43525 872 aa22.03■■□□□ 1.12
SF1-203ENST00000377387 NBPF7P0C2Y1 421 aaPredicted RBP22.03■■□□□ 1.12
SF1-203ENST00000377387 MAP3K5Q99683 1374 aa22.03■■□□□ 1.12
SF1-203ENST00000377387 PPP1R9BQ96SB3 815 aa22.02■■□□□ 1.12
SF1-203ENST00000377387 HTATSF1O43719 755 aaKnown RBP22.02■■□□□ 1.12
SF1-203ENST00000377387 SRCIN1Q9C0H9 1055 aa22.01■■□□□ 1.11
SF1-203ENST00000377387 TOPAZ1Q8N9V7 1692 aa22.01■■□□□ 1.11
SF1-203ENST00000377387 CHPF2Q9P2E5 772 aa22.01■■□□□ 1.11
SF1-203ENST00000377387 NALCNQ8IZF0 1738 aa22■■□□□ 1.11
SF1-203ENST00000377387 PI4KAP2A4QPH2 592 aa22■■□□□ 1.11
SF1-203ENST00000377387 PI4KAP1Q8N8J0 262 aa22■■□□□ 1.11
SF1-203ENST00000377387 MSNP26038 577 aaKnown RBP22■■□□□ 1.11
SF1-203ENST00000377387 OS9Q13438 667 aaPredicted RBP21.99■■□□□ 1.11
SF1-203ENST00000377387 RHPN1Q8TCX5 695 aa21.99■■□□□ 1.11
SF1-203ENST00000377387 STAP2Q9UGK3 403 aa21.99■■□□□ 1.11
SF1-203ENST00000377387 SOS1Q07889 1333 aaPredicted RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms