RNA–Protein interactions for RNA: ENST00000255266.9

PDE6A-201, Transcript of phosphodiesterase 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6A, Length 5,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-201ENST00000255266 AGLP35573 1532 aa11.12□□□□□ -0.63
PDE6A-201ENST00000255266 TSR2Q969E8 191 aaKnown RBP11.12□□□□□ -0.63
PDE6A-201ENST00000255266 KIAA2012Q0VF49 1180 aa11.11□□□□□ -0.63
PDE6A-201ENST00000255266 ZNF335Q9H4Z2 1342 aaPredicted RBP11.11□□□□□ -0.63
PDE6A-201ENST00000255266 MAP3K5Q99683 1374 aa11.11□□□□□ -0.63
PDE6A-201ENST00000255266 SAFBQ15424 915 aaKnown RBP eCLIP11.11□□□□□ -0.63
PDE6A-201ENST00000255266 CCDC87Q9NVE4 849 aa11.11□□□□□ -0.63
PDE6A-201ENST00000255266 RAI14Q9P0K7 980 aa11.11□□□□□ -0.63
PDE6A-201ENST00000255266 SYNMO15061 1565 aa11.11□□□□□ -0.63
PDE6A-201ENST00000255266 SPTY2D1Q68D10 685 aaPredicted RBP11.11□□□□□ -0.63
PDE6A-201ENST00000255266 TPTE2Q6XPS3 522 aa11.11□□□□□ -0.63
PDE6A-201ENST00000255266 ATP6V1DQ9Y5K8 247 aa11.11□□□□□ -0.63
PDE6A-201ENST00000255266 PTMAP06454 111 aaKnown RBP11.11□□□□□ -0.63
PDE6A-201ENST00000255266 TTLL12Q14166 644 aaPredicted RBP11.11□□□□□ -0.63
PDE6A-201ENST00000255266 FAM196AQ6ZSG2 479 aa11.11□□□□□ -0.63
PDE6A-201ENST00000255266 PAXIP1Q6ZW49 1069 aaPredicted RBP11.11□□□□□ -0.63
PDE6A-201ENST00000255266 ANKARQ7Z5J8 1434 aa11.11□□□□□ -0.63
PDE6A-201ENST00000255266 SF3A1Q15459 793 aaKnown RBP11.1□□□□□ -0.63
PDE6A-201ENST00000255266 ATF7IPQ6VMQ6 1270 aa11.1□□□□□ -0.63
PDE6A-201ENST00000255266 DNAAF4Q8WXU2 420 aa11.1□□□□□ -0.63
PDE6A-201ENST00000255266 EYA3Q99504 573 aa11.1□□□□□ -0.63
PDE6A-201ENST00000255266 LDHCP07864 332 aa11.1□□□□□ -0.63
PDE6A-201ENST00000255266 LRRCC1Q9C099 1032 aa11.1□□□□□ -0.63
PDE6A-201ENST00000255266 RAB11FIP3O75154 756 aa11.1□□□□□ -0.63
PDE6A-201ENST00000255266 RBM17Q96I25 401 aaKnown RBP11.1□□□□□ -0.63
PDE6A-201ENST00000255266 NLRP3Q96P20 1036 aa11.1□□□□□ -0.63
PDE6A-201ENST00000255266 ADGRB3O60242 1522 aa11.1□□□□□ -0.63
PDE6A-201ENST00000255266 A0A1W2PP64 1363 aa11.1□□□□□ -0.63
PDE6A-201ENST00000255266 C6orf229H3BNL8 230 aa11.1□□□□□ -0.63
PDE6A-201ENST00000255266 UTP14AQ9BVJ6 771 aaKnown RBP11.1□□□□□ -0.63
PDE6A-201ENST00000255266 LRP2BPQ9P2M1 347 aa11.1□□□□□ -0.63
PDE6A-201ENST00000255266 LMOD1P29536 600 aaPredicted RBP11.09□□□□□ -0.63
PDE6A-201ENST00000255266 GSTO1P78417 241 aa11.09□□□□□ -0.63
PDE6A-201ENST00000255266 EIF4A2Q14240 407 aaKnown RBP11.09□□□□□ -0.63
PDE6A-201ENST00000255266 THRAP3Q9Y2W1 955 aaKnown RBP11.09□□□□□ -0.63
PDE6A-201ENST00000255266 NF2P35240 595 aa11.09□□□□□ -0.63
PDE6A-201ENST00000255266 HSP90AB2PQ58FF8 381 aa11.09□□□□□ -0.63
PDE6A-201ENST00000255266 SAMD1Q6SPF0 538 aaPredicted RBP11.09□□□□□ -0.63
PDE6A-201ENST00000255266 RPAP2Q8IXW5 612 aaPredicted RBP11.09□□□□□ -0.63
PDE6A-201ENST00000255266 ZC3H13Q5T200 1668 aaKnown RBP11.09□□□□□ -0.63
PDE6A-201ENST00000255266 BABAM1Q9NWV8 329 aa11.08□□□□□ -0.64
PDE6A-201ENST00000255266 DZIP1Q86YF9 867 aaKnown RBP11.08□□□□□ -0.64
PDE6A-201ENST00000255266 JDP2Q8WYK2 163 aa11.08□□□□□ -0.64
PDE6A-201ENST00000255266 ZGPATQ8N5A5 531 aaKnown RBP11.08□□□□□ -0.64
PDE6A-201ENST00000255266 DZIP3Q86Y13 1208 aaKnown RBP11.07□□□□□ -0.64
PDE6A-201ENST00000255266 CTNNA3Q9UI47 895 aa11.07□□□□□ -0.64
PDE6A-201ENST00000255266 IQGAP3Q86VI3 1631 aa11.07□□□□□ -0.64
PDE6A-201ENST00000255266 SRGAP3O43295 1099 aa11.07□□□□□ -0.64
PDE6A-201ENST00000255266 GNPATO15228 680 aa11.07□□□□□ -0.64
PDE6A-201ENST00000255266 CDC45O75419 566 aa11.07□□□□□ -0.64
PDE6A-201ENST00000255266 SUPT20HQ8NEM7 779 aa11.07□□□□□ -0.64
PDE6A-201ENST00000255266 PTPRMP28827 1452 aa11.07□□□□□ -0.64
PDE6A-201ENST00000255266 CLTCQ00610 1675 aaKnown RBP11.07□□□□□ -0.64
PDE6A-201ENST00000255266 WWC2Q6AWC2 1192 aa11.07□□□□□ -0.64
PDE6A-201ENST00000255266 ANKRD18AQ8IVF6 992 aa11.07□□□□□ -0.64
PDE6A-201ENST00000255266 SIL1Q9H173 461 aa11.07□□□□□ -0.64
PDE6A-201ENST00000255266 ZBTB3Q9H5J0 574 aa11.07□□□□□ -0.64
PDE6A-201ENST00000255266 CRACR2BQ8N4Y2 399 aaPredicted RBP11.07□□□□□ -0.64
PDE6A-201ENST00000255266 TRIM44Q96DX7 344 aaPredicted RBP11.07□□□□□ -0.64
PDE6A-201ENST00000255266 POLR3AO14802 1390 aaPredicted RBP11.06□□□□□ -0.64
PDE6A-201ENST00000255266 PTPRTO14522 1441 aa11.06□□□□□ -0.64
PDE6A-201ENST00000255266 UNC5CLQ8IV45 518 aa11.06□□□□□ -0.64
PDE6A-201ENST00000255266 KDM5AP29375 1690 aaKnown RBP11.06□□□□□ -0.64
PDE6A-201ENST00000255266 TPM2P07951 284 aa11.06□□□□□ -0.64
PDE6A-201ENST00000255266 MIS18AQ9NYP9 233 aa11.06□□□□□ -0.64
PDE6A-201ENST00000255266 RTL1A6NKG5 1358 aa11.06□□□□□ -0.64
PDE6A-201ENST00000255266 JCADQ9P266 1359 aa11.06□□□□□ -0.64
PDE6A-201ENST00000255266 PARP10Q53GL7 1025 aa11.06□□□□□ -0.64
PDE6A-201ENST00000255266 AACSQ86V21 672 aa11.06□□□□□ -0.64
PDE6A-201ENST00000255266 ZNF219Q9P2Y4 722 aaPredicted RBP11.06□□□□□ -0.64
PDE6A-201ENST00000255266 ZRANB1Q9UGI0 708 aa11.06□□□□□ -0.64
PDE6A-201ENST00000255266 NIP7Q9Y221 180 aaKnown RBP eCLIP11.06□□□□□ -0.64
PDE6A-201ENST00000255266 RNMTO43148 476 aaKnown RBP11.05□□□□□ -0.64
PDE6A-201ENST00000255266 GPTP24298 496 aa11.05□□□□□ -0.64
PDE6A-201ENST00000255266 KRT27Q7Z3Y8 459 aa11.05□□□□□ -0.64
PDE6A-201ENST00000255266 SPATA31A6Q5VVP1 1343 aa11.05□□□□□ -0.64
PDE6A-201ENST00000255266 RIMS1Q86UR5 1692 aaKnown RBP11.05□□□□□ -0.64
PDE6A-201ENST00000255266 USP5P45974 858 aa11.05□□□□□ -0.64
PDE6A-201ENST00000255266 TTF1Q15361 905 aaPredicted RBP11.05□□□□□ -0.64
PDE6A-201ENST00000255266 PPP4R3BQ5MIZ7 849 aa11.05□□□□□ -0.64
PDE6A-201ENST00000255266 ANKRD2Q9GZV1 360 aa11.05□□□□□ -0.64
PDE6A-201ENST00000255266 HOOK1Q9UJC3 728 aaKnown RBP11.05□□□□□ -0.64
PDE6A-201ENST00000255266 CFAP65Q6ZU64 1925 aaKnown RBP11.05□□□□□ -0.64
PDE6A-201ENST00000255266 DIP2CQ9Y2E4 1556 aa11.05□□□□□ -0.64
PDE6A-201ENST00000255266 ERVV-2B6SEH9 535 aa11.05□□□□□ -0.64
PDE6A-201ENST00000255266 MAP3K12Q12852 859 aa11.05□□□□□ -0.64
PDE6A-201ENST00000255266 ANKRD13DQ6ZTN6 518 aa11.05□□□□□ -0.64
PDE6A-201ENST00000255266 ZNF804AQ7Z570 1209 aa11.05□□□□□ -0.64
PDE6A-201ENST00000255266 PANK1Q8TE04 598 aa11.05□□□□□ -0.64
PDE6A-201ENST00000255266 MAP3K19Q56UN5 1328 aa11.05□□□□□ -0.64
PDE6A-201ENST00000255266 CLEC11AQ9Y240 323 aa11.05□□□□□ -0.64
PDE6A-201ENST00000255266 POLKQ9UBT6 870 aa11.04□□□□□ -0.64
PDE6A-201ENST00000255266 ATP7BP35670 1465 aa11.04□□□□□ -0.64
PDE6A-201ENST00000255266 ATP2B2Q01814 1243 aa11.04□□□□□ -0.64
PDE6A-201ENST00000255266 MVPQ14764 893 aaKnown RBP11.04□□□□□ -0.64
PDE6A-201ENST00000255266 MAP3K2Q9Y2U5 619 aa11.04□□□□□ -0.64
PDE6A-201ENST00000255266 CAMSAP1Q5T5Y3 1602 aa11.04□□□□□ -0.64
PDE6A-201ENST00000255266 DCTN1Q14203 1278 aa11.04□□□□□ -0.64
PDE6A-201ENST00000255266 GLIPR1L2Q4G1C9 344 aa11.04□□□□□ -0.64
PDE6A-201ENST00000255266 BAG3O95817 575 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms