RNA–Protein interactions for RNA: ENST00000229307.8

NANOG-201, Transcript of Nanog homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NANOG, Length 5,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NANOG-201ENST00000229307 WDHD1O75717 1129 aaPredicted RBP9.68□□□□□ -0.86
NANOG-201ENST00000229307 CAVIN4Q5BKX8 364 aa9.68□□□□□ -0.86
NANOG-201ENST00000229307 DCAF5Q96JK2 942 aa9.68□□□□□ -0.86
NANOG-201ENST00000229307 ARHGAP23Q9P227 1491 aa9.68□□□□□ -0.86
NANOG-201ENST00000229307 DEPDC5O75140 1603 aa9.68□□□□□ -0.86
NANOG-201ENST00000229307 HSP90AB2PQ58FF8 381 aa9.68□□□□□ -0.86
NANOG-201ENST00000229307 DIP2AQ14689 1571 aa9.67□□□□□ -0.86
NANOG-201ENST00000229307 IFIT1P09914 478 aaKnown RBP9.67□□□□□ -0.86
NANOG-201ENST00000229307 TRIM44Q96DX7 344 aaPredicted RBP9.67□□□□□ -0.86
NANOG-201ENST00000229307 ACSBG1Q96GR2 724 aa9.67□□□□□ -0.86
NANOG-201ENST00000229307 DNAJC2Q99543 621 aaKnown RBP9.67□□□□□ -0.86
NANOG-201ENST00000229307 TSHZ2Q9NRE2 1034 aa9.67□□□□□ -0.86
NANOG-201ENST00000229307 TRPC5Q9UL62 973 aaPredicted RBP9.67□□□□□ -0.86
NANOG-201ENST00000229307 IL16Q14005 1332 aa9.67□□□□□ -0.86
NANOG-201ENST00000229307 CDC5LQ99459 802 aaKnown RBP9.67□□□□□ -0.86
NANOG-201ENST00000229307 MYD88Q99836 296 aa9.67□□□□□ -0.86
NANOG-201ENST00000229307 PLEKHG3A1L390 1219 aa9.67□□□□□ -0.86
NANOG-201ENST00000229307 PHF14O94880 888 aa9.67□□□□□ -0.86
NANOG-201ENST00000229307 SYAP1Q96A49 352 aaPredicted RBP9.67□□□□□ -0.86
NANOG-201ENST00000229307 HOXC9P31274 260 aa9.67□□□□□ -0.86
NANOG-201ENST00000229307 DDX46Q7L014 1031 aaKnown RBP9.67□□□□□ -0.86
NANOG-201ENST00000229307 PIK3C2BO00750 1634 aa9.66□□□□□ -0.86
NANOG-201ENST00000229307 BAG6P46379 1132 aa9.66□□□□□ -0.86
NANOG-201ENST00000229307 SLF2Q8IX21 1173 aa9.66□□□□□ -0.86
NANOG-201ENST00000229307 ANKIB1Q9P2G1 1089 aa9.66□□□□□ -0.86
NANOG-201ENST00000229307 ANKRD18BA2A2Z9 1011 aa9.66□□□□□ -0.86
NANOG-201ENST00000229307 IFIT5Q13325 482 aaKnown RBP9.66□□□□□ -0.86
NANOG-201ENST00000229307 LRRCC1Q9C099 1032 aa9.66□□□□□ -0.86
NANOG-201ENST00000229307 NYXQ9GZU5 481 aa9.66□□□□□ -0.86
NANOG-201ENST00000229307 RTCBQ9Y3I0 505 aaKnown RBP9.66□□□□□ -0.86
NANOG-201ENST00000229307 ATP6V1DQ9Y5K8 247 aa9.66□□□□□ -0.86
NANOG-201ENST00000229307 SBNO1A3KN83 1393 aa9.66□□□□□ -0.86
NANOG-201ENST00000229307 PSMA5P28066 241 aa9.66□□□□□ -0.86
NANOG-201ENST00000229307 SF3A1Q15459 793 aaKnown RBP9.66□□□□□ -0.86
NANOG-201ENST00000229307 FAM161AQ3B820 660 aa9.66□□□□□ -0.86
NANOG-201ENST00000229307 NCBP3Q53F19 620 aaKnown RBP9.66□□□□□ -0.86
NANOG-201ENST00000229307 RPAP2Q8IXW5 612 aaPredicted RBP9.66□□□□□ -0.86
NANOG-201ENST00000229307 MIS18AQ9NYP9 233 aa9.66□□□□□ -0.86
NANOG-201ENST00000229307 TPM4P67936 248 aa9.66□□□□□ -0.86
NANOG-201ENST00000229307 METTL24Q5JXM2 366 aa9.66□□□□□ -0.86
NANOG-201ENST00000229307 UNC13BO14795 1591 aa9.66□□□□□ -0.86
NANOG-201ENST00000229307 A0A1W2PP64 1363 aa9.65□□□□□ -0.86
NANOG-201ENST00000229307 PTPRCP08575 1304 aa9.65□□□□□ -0.86
NANOG-201ENST00000229307 SOCS7O14512 581 aa9.65□□□□□ -0.86
NANOG-201ENST00000229307 EIF4A2Q14240 407 aaKnown RBP9.65□□□□□ -0.86
NANOG-201ENST00000229307 DNAAF4Q8WXU2 420 aa9.65□□□□□ -0.86
NANOG-201ENST00000229307 SETDB2Q96T68 719 aa9.65□□□□□ -0.86
NANOG-201ENST00000229307 TFCP2L1Q9NZI6 479 aa9.65□□□□□ -0.86
NANOG-201ENST00000229307 LRRC7Q96NW7 1537 aa9.65□□□□□ -0.86
NANOG-201ENST00000229307 SYNMO15061 1565 aa9.65□□□□□ -0.86
NANOG-201ENST00000229307 SRGAP3O43295 1099 aa9.65□□□□□ -0.86
NANOG-201ENST00000229307 NBPF6Q5VWK0 638 aa9.65□□□□□ -0.86
NANOG-201ENST00000229307 NBPF5PQ86XG9 351 aaPredicted RBP9.65□□□□□ -0.86
NANOG-201ENST00000229307 NBPF4Q96M43 638 aa9.65□□□□□ -0.86
NANOG-201ENST00000229307 PARP3Q9Y6F1 533 aa9.65□□□□□ -0.86
NANOG-201ENST00000229307 IQGAP3Q86VI3 1631 aa9.65□□□□□ -0.86
NANOG-201ENST00000229307 DCTN1Q14203 1278 aa9.65□□□□□ -0.86
NANOG-201ENST00000229307 CWC25Q9NXE8 425 aaPredicted RBP9.65□□□□□ -0.86
NANOG-201ENST00000229307 CDC45O75419 566 aa9.65□□□□□ -0.87
NANOG-201ENST00000229307 IKQ13123 557 aaPredicted RBP9.65□□□□□ -0.87
NANOG-201ENST00000229307 CDCA7LQ96GN5 454 aa9.65□□□□□ -0.87
NANOG-201ENST00000229307 XBP1P17861 261 aa9.64□□□□□ -0.87
NANOG-201ENST00000229307 SLFN5Q08AF3 891 aa9.64□□□□□ -0.87
NANOG-201ENST00000229307 LNPKQ9C0E8 428 aa9.64□□□□□ -0.87
NANOG-201ENST00000229307 DCCP43146 1447 aa9.64□□□□□ -0.87
NANOG-201ENST00000229307 SLC5A1P13866 664 aa9.64□□□□□ -0.87
NANOG-201ENST00000229307 NOL8Q76FK4 1167 aaKnown RBP9.64□□□□□ -0.87
NANOG-201ENST00000229307 SIL1Q9H173 461 aa9.64□□□□□ -0.87
NANOG-201ENST00000229307 QTRT2Q9H974 415 aaKnown RBP9.64□□□□□ -0.87
NANOG-201ENST00000229307 BRMS1Q9HCU9 246 aa9.64□□□□□ -0.87
NANOG-201ENST00000229307 SAFBQ15424 915 aaKnown RBP eCLIP9.64□□□□□ -0.87
NANOG-201ENST00000229307 POLKQ9UBT6 870 aa9.64□□□□□ -0.87
NANOG-201ENST00000229307 POLR1AO95602 1720 aaPredicted RBP9.63□□□□□ -0.87
NANOG-201ENST00000229307 MVPQ14764 893 aaKnown RBP9.63□□□□□ -0.87
NANOG-201ENST00000229307 GLIPR1L2Q4G1C9 344 aa9.63□□□□□ -0.87
NANOG-201ENST00000229307 ZNF622Q969S3 477 aaKnown RBP eCLIP9.63□□□□□ -0.87
NANOG-201ENST00000229307 THUMPD2Q9BTF0 503 aaKnown RBP9.63□□□□□ -0.87
NANOG-201ENST00000229307 ADGRL3Q9HAR2 1447 aa9.63□□□□□ -0.87
NANOG-201ENST00000229307 RAB11FIP3O75154 756 aa9.63□□□□□ -0.87
NANOG-201ENST00000229307 RBM6P78332 1123 aaKnown RBP9.63□□□□□ -0.87
NANOG-201ENST00000229307 CHAF1AQ13111 956 aaPredicted RBP9.63□□□□□ -0.87
NANOG-201ENST00000229307 BRINP3Q76B58 766 aa9.63□□□□□ -0.87
NANOG-201ENST00000229307 SPRYD3Q8NCJ5 442 aa9.63□□□□□ -0.87
NANOG-201ENST00000229307 RAI14Q9P0K7 980 aa9.63□□□□□ -0.87
NANOG-201ENST00000229307 PLCB2Q00722 1185 aa9.63□□□□□ -0.87
NANOG-201ENST00000229307 ZNF287Q9HBT7 754 aa9.63□□□□□ -0.87
NANOG-201ENST00000229307 MAP3K5Q99683 1374 aa9.63□□□□□ -0.87
NANOG-201ENST00000229307 NOP58Q9Y2X3 529 aaKnown RBP9.63□□□□□ -0.87
NANOG-201ENST00000229307 CCDC152Q4G0S7 254 aa9.62□□□□□ -0.87
NANOG-201ENST00000229307 ZBTB3Q9H5J0 574 aa9.62□□□□□ -0.87
NANOG-201ENST00000229307 LRP2BPQ9P2M1 347 aa9.62□□□□□ -0.87
NANOG-201ENST00000229307 CCDC43Q96MW1 224 aaKnown RBP9.62□□□□□ -0.87
NANOG-201ENST00000229307 SOS1Q07889 1333 aaPredicted RBP9.62□□□□□ -0.87
NANOG-201ENST00000229307 MAP3K19Q56UN5 1328 aa9.62□□□□□ -0.87
NANOG-201ENST00000229307 MYOM2P54296 1465 aa9.62□□□□□ -0.87
NANOG-201ENST00000229307 AACSQ86V21 672 aa9.62□□□□□ -0.87
NANOG-201ENST00000229307 ZSCAN29Q8IWY8 852 aaPredicted RBP9.62□□□□□ -0.87
NANOG-201ENST00000229307 POLR3AO14802 1390 aaPredicted RBP9.62□□□□□ -0.87
NANOG-201ENST00000229307 FAM98CQ17RN3 349 aaKnown RBP9.62□□□□□ -0.87
NANOG-201ENST00000229307 CCDC47Q96A33 483 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms