Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CcsQ9WU84 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcsQ9WU84 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC12.42□□□□□ -0.42
CcsQ9WU84 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC12.42□□□□□ -0.42
CcsQ9WU84 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CcsQ9WU84 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcsQ9WU84 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcsQ9WU84 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CcsQ9WU84 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcsQ9WU84 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcsQ9WU84 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcsQ9WU84 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC12.42□□□□□ -0.42
CcsQ9WU84 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcsQ9WU84 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcsQ9WU84 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcsQ9WU84 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.42□□□□□ -0.42
CcsQ9WU84 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcsQ9WU84 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcsQ9WU84 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CcsQ9WU84 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcsQ9WU84 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
CcsQ9WU84 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcsQ9WU84 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcsQ9WU84 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
CcsQ9WU84 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
CcsQ9WU84 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CcsQ9WU84 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
CcsQ9WU84 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
CcsQ9WU84 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CcsQ9WU84 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CcsQ9WU84 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CcsQ9WU84 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CcsQ9WU84 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CcsQ9WU84 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CcsQ9WU84 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CcsQ9WU84 AC108858.1-201ENSMUST00000228461 1498 ntBASIC12.41□□□□□ -0.42
CcsQ9WU84 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CcsQ9WU84 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.41□□□□□ -0.42
CcsQ9WU84 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CcsQ9WU84 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CcsQ9WU84 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CcsQ9WU84 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CcsQ9WU84 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CcsQ9WU84 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CcsQ9WU84 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC12.41□□□□□ -0.42
CcsQ9WU84 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC12.41□□□□□ -0.42
CcsQ9WU84 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CcsQ9WU84 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.41□□□□□ -0.42
CcsQ9WU84 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CcsQ9WU84 Gm21814-202ENSMUST00000203277 873 ntBASIC12.41□□□□□ -0.42
CcsQ9WU84 Odf3b-204ENSMUST00000227834 930 ntBASIC12.41□□□□□ -0.42
CcsQ9WU84 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
CcsQ9WU84 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CcsQ9WU84 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CcsQ9WU84 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CcsQ9WU84 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
CcsQ9WU84 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CcsQ9WU84 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CcsQ9WU84 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC12.41□□□□□ -0.42
CcsQ9WU84 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
CcsQ9WU84 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
CcsQ9WU84 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcsQ9WU84 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcsQ9WU84 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcsQ9WU84 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CcsQ9WU84 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC12.4□□□□□ -0.42
CcsQ9WU84 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CcsQ9WU84 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcsQ9WU84 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcsQ9WU84 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.4□□□□□ -0.42
CcsQ9WU84 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcsQ9WU84 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CcsQ9WU84 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcsQ9WU84 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcsQ9WU84 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcsQ9WU84 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC12.4□□□□□ -0.42
CcsQ9WU84 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CcsQ9WU84 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CcsQ9WU84 Gm9484-201ENSMUST00000195892 1159 ntBASIC12.4□□□□□ -0.42
CcsQ9WU84 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcsQ9WU84 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcsQ9WU84 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CcsQ9WU84 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
CcsQ9WU84 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcsQ9WU84 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CcsQ9WU84 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcsQ9WU84 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcsQ9WU84 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcsQ9WU84 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcsQ9WU84 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CcsQ9WU84 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.4□□□□□ -0.42
CcsQ9WU84 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CcsQ9WU84 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcsQ9WU84 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcsQ9WU84 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CcsQ9WU84 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
CcsQ9WU84 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CcsQ9WU84 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
CcsQ9WU84 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CcsQ9WU84 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms