Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lhx6Q9R1R0 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lhx6Q9R1R0 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Lhx6Q9R1R0 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Lhx6Q9R1R0 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lhx6Q9R1R0 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Lhx6Q9R1R0 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.03■□□□□ -0
Lhx6Q9R1R0 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.03■□□□□ -0
Lhx6Q9R1R0 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Lhx6Q9R1R0 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lhx6Q9R1R0 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lhx6Q9R1R0 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lhx6Q9R1R0 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC15.03■□□□□ -0
Lhx6Q9R1R0 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Lhx6Q9R1R0 Gm24380-201ENSMUST00000122696 324 ntBASIC15.03■□□□□ -0
Lhx6Q9R1R0 Gm25653-201ENSMUST00000158473 138 ntBASIC15.03■□□□□ -0
Lhx6Q9R1R0 Gm38018-201ENSMUST00000195651 540 ntBASIC15.03■□□□□ -0
Lhx6Q9R1R0 Gm43244-201ENSMUST00000196994 1285 ntBASIC15.03■□□□□ -0
Lhx6Q9R1R0 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC15.03■□□□□ -0
Lhx6Q9R1R0 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lhx6Q9R1R0 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lhx6Q9R1R0 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Lhx6Q9R1R0 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lhx6Q9R1R0 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lhx6Q9R1R0 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lhx6Q9R1R0 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.03■□□□□ -0
Lhx6Q9R1R0 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Lhx6Q9R1R0 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lhx6Q9R1R0 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.02■□□□□ -0
Lhx6Q9R1R0 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.02■□□□□ -0
Lhx6Q9R1R0 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.02■□□□□ -0
Lhx6Q9R1R0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lhx6Q9R1R0 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.02■□□□□ -0
Lhx6Q9R1R0 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lhx6Q9R1R0 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC15.02■□□□□ -0
Lhx6Q9R1R0 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lhx6Q9R1R0 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.02■□□□□ -0
Lhx6Q9R1R0 Gm7230-201ENSMUST00000173026 815 ntBASIC15.02■□□□□ -0
Lhx6Q9R1R0 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.02■□□□□ -0
Lhx6Q9R1R0 Gm43767-201ENSMUST00000198933 381 ntBASIC15.02■□□□□ -0
Lhx6Q9R1R0 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.02■□□□□ -0
Lhx6Q9R1R0 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Lhx6Q9R1R0 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.02■□□□□ -0
Lhx6Q9R1R0 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lhx6Q9R1R0 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lhx6Q9R1R0 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lhx6Q9R1R0 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Lhx6Q9R1R0 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lhx6Q9R1R0 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Lhx6Q9R1R0 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lhx6Q9R1R0 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lhx6Q9R1R0 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lhx6Q9R1R0 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lhx6Q9R1R0 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lhx6Q9R1R0 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lhx6Q9R1R0 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Lhx6Q9R1R0 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lhx6Q9R1R0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lhx6Q9R1R0 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lhx6Q9R1R0 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.01□□□□□ -0.01
Lhx6Q9R1R0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Lhx6Q9R1R0 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lhx6Q9R1R0 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC15.01□□□□□ -0.01
Lhx6Q9R1R0 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.01□□□□□ -0.01
Lhx6Q9R1R0 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.01□□□□□ -0.01
Lhx6Q9R1R0 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC15.01□□□□□ -0.01
Lhx6Q9R1R0 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC15.01□□□□□ -0.01
Lhx6Q9R1R0 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lhx6Q9R1R0 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.01□□□□□ -0.01
Lhx6Q9R1R0 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lhx6Q9R1R0 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lhx6Q9R1R0 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Lhx6Q9R1R0 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lhx6Q9R1R0 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lhx6Q9R1R0 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lhx6Q9R1R0 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.01□□□□□ -0.01
Lhx6Q9R1R0 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lhx6Q9R1R0 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lhx6Q9R1R0 Dancr-204ENSMUST00000132389 2347 ntBASIC15.01□□□□□ -0.01
Lhx6Q9R1R0 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Lhx6Q9R1R0 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lhx6Q9R1R0 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lhx6Q9R1R0 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lhx6Q9R1R0 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lhx6Q9R1R0 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Lhx6Q9R1R0 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lhx6Q9R1R0 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Lhx6Q9R1R0 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Lhx6Q9R1R0 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Lhx6Q9R1R0 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Lhx6Q9R1R0 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Lhx6Q9R1R0 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Lhx6Q9R1R0 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Lhx6Q9R1R0 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Lhx6Q9R1R0 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Lhx6Q9R1R0 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Lhx6Q9R1R0 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15□□□□□ -0.01
Lhx6Q9R1R0 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC15□□□□□ -0.01
Lhx6Q9R1R0 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Lhx6Q9R1R0 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms