Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tubd1Q9R1K7 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.16■□□□□ 0.18
Tubd1Q9R1K7 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.16■□□□□ 0.18
Tubd1Q9R1K7 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tubd1Q9R1K7 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tubd1Q9R1K7 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tubd1Q9R1K7 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tubd1Q9R1K7 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tubd1Q9R1K7 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.16■□□□□ 0.18
Tubd1Q9R1K7 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.16■□□□□ 0.18
Tubd1Q9R1K7 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tubd1Q9R1K7 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.16■□□□□ 0.18
Tubd1Q9R1K7 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tubd1Q9R1K7 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Tubd1Q9R1K7 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tubd1Q9R1K7 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Tubd1Q9R1K7 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tubd1Q9R1K7 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tubd1Q9R1K7 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.16■□□□□ 0.18
Tubd1Q9R1K7 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tubd1Q9R1K7 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Tubd1Q9R1K7 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Tubd1Q9R1K7 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.16■□□□□ 0.18
Tubd1Q9R1K7 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Tubd1Q9R1K7 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tubd1Q9R1K7 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tubd1Q9R1K7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Tubd1Q9R1K7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.15■□□□□ 0.18
Tubd1Q9R1K7 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tubd1Q9R1K7 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
Tubd1Q9R1K7 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Tubd1Q9R1K7 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.15■□□□□ 0.18
Tubd1Q9R1K7 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tubd1Q9R1K7 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tubd1Q9R1K7 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tubd1Q9R1K7 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tubd1Q9R1K7 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.15■□□□□ 0.18
Tubd1Q9R1K7 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tubd1Q9R1K7 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Tubd1Q9R1K7 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tubd1Q9R1K7 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tubd1Q9R1K7 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tubd1Q9R1K7 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Tubd1Q9R1K7 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Tubd1Q9R1K7 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Tubd1Q9R1K7 App-207ENSMUST00000227737 2827 ntBASIC16.14■□□□□ 0.17
Tubd1Q9R1K7 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tubd1Q9R1K7 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tubd1Q9R1K7 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tubd1Q9R1K7 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tubd1Q9R1K7 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Tubd1Q9R1K7 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.14■□□□□ 0.17
Tubd1Q9R1K7 Gm8097-201ENSMUST00000117903 829 ntBASIC16.14■□□□□ 0.17
Tubd1Q9R1K7 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC16.14■□□□□ 0.17
Tubd1Q9R1K7 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Tubd1Q9R1K7 Gm27459-201ENSMUST00000184860 107 ntBASIC16.14■□□□□ 0.17
Tubd1Q9R1K7 Gm17971-201ENSMUST00000190239 806 ntBASIC16.14■□□□□ 0.17
Tubd1Q9R1K7 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Tubd1Q9R1K7 Prob1-201ENSMUST00000097619 3021 ntBASIC16.14■□□□□ 0.17
Tubd1Q9R1K7 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Tubd1Q9R1K7 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tubd1Q9R1K7 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.13■□□□□ 0.17
Tubd1Q9R1K7 Gm8344-201ENSMUST00000119813 856 ntBASIC16.13■□□□□ 0.17
Tubd1Q9R1K7 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.13■□□□□ 0.17
Tubd1Q9R1K7 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.13■□□□□ 0.17
Tubd1Q9R1K7 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tubd1Q9R1K7 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Tubd1Q9R1K7 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.13■□□□□ 0.17
Tubd1Q9R1K7 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tubd1Q9R1K7 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Tubd1Q9R1K7 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tubd1Q9R1K7 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tubd1Q9R1K7 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Tubd1Q9R1K7 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.12■□□□□ 0.17
Tubd1Q9R1K7 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tubd1Q9R1K7 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Tubd1Q9R1K7 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tubd1Q9R1K7 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tubd1Q9R1K7 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tubd1Q9R1K7 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tubd1Q9R1K7 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tubd1Q9R1K7 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Tubd1Q9R1K7 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Tubd1Q9R1K7 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tubd1Q9R1K7 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tubd1Q9R1K7 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Tubd1Q9R1K7 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tubd1Q9R1K7 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Tubd1Q9R1K7 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tubd1Q9R1K7 Gm19164-201ENSMUST00000210667 640 ntBASIC16.12■□□□□ 0.17
Tubd1Q9R1K7 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tubd1Q9R1K7 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.12■□□□□ 0.17
Tubd1Q9R1K7 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tubd1Q9R1K7 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.12■□□□□ 0.17
Tubd1Q9R1K7 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tubd1Q9R1K7 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tubd1Q9R1K7 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tubd1Q9R1K7 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tubd1Q9R1K7 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Tubd1Q9R1K7 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms