Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nubp2Q9R061 Gm27742-201ENSMUST00000184667 60 ntBASIC14.15□□□□□ -0.14
Nubp2Q9R061 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nubp2Q9R061 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.15□□□□□ -0.14
Nubp2Q9R061 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nubp2Q9R061 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nubp2Q9R061 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nubp2Q9R061 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nubp2Q9R061 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nubp2Q9R061 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nubp2Q9R061 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nubp2Q9R061 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Nubp2Q9R061 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nubp2Q9R061 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Nubp2Q9R061 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nubp2Q9R061 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Nubp2Q9R061 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Nubp2Q9R061 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Nubp2Q9R061 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nubp2Q9R061 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Nubp2Q9R061 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Nubp2Q9R061 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Nubp2Q9R061 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nubp2Q9R061 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Nubp2Q9R061 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nubp2Q9R061 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC14.14□□□□□ -0.15
Nubp2Q9R061 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nubp2Q9R061 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.14□□□□□ -0.15
Nubp2Q9R061 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nubp2Q9R061 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.14□□□□□ -0.15
Nubp2Q9R061 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nubp2Q9R061 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nubp2Q9R061 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nubp2Q9R061 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Nubp2Q9R061 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC14.14□□□□□ -0.15
Nubp2Q9R061 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.14□□□□□ -0.15
Nubp2Q9R061 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nubp2Q9R061 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC14.14□□□□□ -0.15
Nubp2Q9R061 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nubp2Q9R061 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.14□□□□□ -0.15
Nubp2Q9R061 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nubp2Q9R061 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nubp2Q9R061 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.14□□□□□ -0.15
Nubp2Q9R061 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nubp2Q9R061 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nubp2Q9R061 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nubp2Q9R061 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nubp2Q9R061 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Nubp2Q9R061 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Nubp2Q9R061 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nubp2Q9R061 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Nubp2Q9R061 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nubp2Q9R061 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nubp2Q9R061 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nubp2Q9R061 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Nubp2Q9R061 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nubp2Q9R061 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nubp2Q9R061 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.13□□□□□ -0.15
Nubp2Q9R061 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.13□□□□□ -0.15
Nubp2Q9R061 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nubp2Q9R061 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nubp2Q9R061 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Nubp2Q9R061 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.13□□□□□ -0.15
Nubp2Q9R061 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nubp2Q9R061 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.13□□□□□ -0.15
Nubp2Q9R061 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nubp2Q9R061 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Nubp2Q9R061 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nubp2Q9R061 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nubp2Q9R061 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nubp2Q9R061 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nubp2Q9R061 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nubp2Q9R061 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nubp2Q9R061 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nubp2Q9R061 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Nubp2Q9R061 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nubp2Q9R061 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nubp2Q9R061 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nubp2Q9R061 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nubp2Q9R061 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Nubp2Q9R061 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Nubp2Q9R061 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Nubp2Q9R061 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nubp2Q9R061 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nubp2Q9R061 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.12□□□□□ -0.15
Nubp2Q9R061 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nubp2Q9R061 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nubp2Q9R061 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nubp2Q9R061 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nubp2Q9R061 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.12□□□□□ -0.15
Nubp2Q9R061 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nubp2Q9R061 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nubp2Q9R061 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Nubp2Q9R061 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nubp2Q9R061 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Nubp2Q9R061 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Nubp2Q9R061 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Nubp2Q9R061 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Nubp2Q9R061 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
Nubp2Q9R061 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms