Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Col4a4Q9QZR9 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Col4a4Q9QZR9 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Col4a4Q9QZR9 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.83■□□□□ 0.13
Col4a4Q9QZR9 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col4a4Q9QZR9 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col4a4Q9QZR9 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col4a4Q9QZR9 AC130669.1-201ENSMUST00000228537 1672 ntBASIC15.83■□□□□ 0.12
Col4a4Q9QZR9 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col4a4Q9QZR9 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Col4a4Q9QZR9 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Col4a4Q9QZR9 Gm14767-201ENSMUST00000121559 586 ntBASIC15.83■□□□□ 0.12
Col4a4Q9QZR9 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.83■□□□□ 0.12
Col4a4Q9QZR9 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.83■□□□□ 0.12
Col4a4Q9QZR9 Gm8318-201ENSMUST00000182954 872 ntBASIC15.83■□□□□ 0.12
Col4a4Q9QZR9 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Col4a4Q9QZR9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a4Q9QZR9 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a4Q9QZR9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a4Q9QZR9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a4Q9QZR9 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a4Q9QZR9 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a4Q9QZR9 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Col4a4Q9QZR9 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a4Q9QZR9 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a4Q9QZR9 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a4Q9QZR9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a4Q9QZR9 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Col4a4Q9QZR9 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a4Q9QZR9 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a4Q9QZR9 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Col4a4Q9QZR9 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Col4a4Q9QZR9 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.82■□□□□ 0.12
Col4a4Q9QZR9 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.82■□□□□ 0.12
Col4a4Q9QZR9 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15.82■□□□□ 0.12
Col4a4Q9QZR9 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a4Q9QZR9 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a4Q9QZR9 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a4Q9QZR9 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Col4a4Q9QZR9 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a4Q9QZR9 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Col4a4Q9QZR9 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col4a4Q9QZR9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col4a4Q9QZR9 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.81■□□□□ 0.12
Col4a4Q9QZR9 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col4a4Q9QZR9 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Col4a4Q9QZR9 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col4a4Q9QZR9 Gm18737-201ENSMUST00000173594 937 ntBASIC15.81■□□□□ 0.12
Col4a4Q9QZR9 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col4a4Q9QZR9 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Col4a4Q9QZR9 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col4a4Q9QZR9 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Col4a4Q9QZR9 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.81■□□□□ 0.12
Col4a4Q9QZR9 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.81■□□□□ 0.12
Col4a4Q9QZR9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col4a4Q9QZR9 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col4a4Q9QZR9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col4a4Q9QZR9 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Col4a4Q9QZR9 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col4a4Q9QZR9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col4a4Q9QZR9 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col4a4Q9QZR9 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col4a4Q9QZR9 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.8■□□□□ 0.12
Col4a4Q9QZR9 Gm2272-201ENSMUST00000194903 582 ntBASIC15.8■□□□□ 0.12
Col4a4Q9QZR9 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC15.8■□□□□ 0.12
Col4a4Q9QZR9 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col4a4Q9QZR9 Gm25857-201ENSMUST00000082788 129 ntBASIC15.8■□□□□ 0.12
Col4a4Q9QZR9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC15.8■□□□□ 0.12
Col4a4Q9QZR9 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col4a4Q9QZR9 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Col4a4Q9QZR9 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col4a4Q9QZR9 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.8■□□□□ 0.12
Col4a4Q9QZR9 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col4a4Q9QZR9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col4a4Q9QZR9 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col4a4Q9QZR9 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.8■□□□□ 0.12
Col4a4Q9QZR9 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Col4a4Q9QZR9 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC15.79■□□□□ 0.12
Col4a4Q9QZR9 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC15.79■□□□□ 0.12
Col4a4Q9QZR9 Gm18187-201ENSMUST00000196476 984 ntBASIC15.79■□□□□ 0.12
Col4a4Q9QZR9 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col4a4Q9QZR9 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.79■□□□□ 0.12
Col4a4Q9QZR9 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col4a4Q9QZR9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col4a4Q9QZR9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col4a4Q9QZR9 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col4a4Q9QZR9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col4a4Q9QZR9 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col4a4Q9QZR9 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.79■□□□□ 0.12
Col4a4Q9QZR9 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col4a4Q9QZR9 Gm12138-201ENSMUST00000122180 951 ntBASIC15.79■□□□□ 0.12
Col4a4Q9QZR9 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC15.79■□□□□ 0.12
Col4a4Q9QZR9 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col4a4Q9QZR9 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col4a4Q9QZR9 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.79■□□□□ 0.12
Col4a4Q9QZR9 AC125350.2-201ENSMUST00000224737 727 ntBASIC15.79■□□□□ 0.12
Col4a4Q9QZR9 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Col4a4Q9QZR9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col4a4Q9QZR9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col4a4Q9QZR9 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms