Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Clcf1Q9QZM3 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Clcf1Q9QZM3 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clcf1Q9QZM3 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clcf1Q9QZM3 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clcf1Q9QZM3 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Clcf1Q9QZM3 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clcf1Q9QZM3 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clcf1Q9QZM3 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Clcf1Q9QZM3 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clcf1Q9QZM3 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clcf1Q9QZM3 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clcf1Q9QZM3 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clcf1Q9QZM3 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clcf1Q9QZM3 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Clcf1Q9QZM3 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
Clcf1Q9QZM3 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
Clcf1Q9QZM3 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
Clcf1Q9QZM3 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Clcf1Q9QZM3 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clcf1Q9QZM3 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Clcf1Q9QZM3 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Clcf1Q9QZM3 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Clcf1Q9QZM3 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clcf1Q9QZM3 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Clcf1Q9QZM3 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Clcf1Q9QZM3 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clcf1Q9QZM3 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clcf1Q9QZM3 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Clcf1Q9QZM3 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC14.45□□□□□ -0.1
Clcf1Q9QZM3 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcf1Q9QZM3 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcf1Q9QZM3 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcf1Q9QZM3 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcf1Q9QZM3 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcf1Q9QZM3 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcf1Q9QZM3 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.45□□□□□ -0.1
Clcf1Q9QZM3 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clcf1Q9QZM3 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Clcf1Q9QZM3 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcf1Q9QZM3 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcf1Q9QZM3 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clcf1Q9QZM3 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcf1Q9QZM3 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clcf1Q9QZM3 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.45□□□□□ -0.1
Clcf1Q9QZM3 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcf1Q9QZM3 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcf1Q9QZM3 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clcf1Q9QZM3 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.45□□□□□ -0.1
Clcf1Q9QZM3 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcf1Q9QZM3 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcf1Q9QZM3 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Clcf1Q9QZM3 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clcf1Q9QZM3 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcf1Q9QZM3 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcf1Q9QZM3 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clcf1Q9QZM3 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcf1Q9QZM3 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Clcf1Q9QZM3 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Clcf1Q9QZM3 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcf1Q9QZM3 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Clcf1Q9QZM3 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Clcf1Q9QZM3 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Clcf1Q9QZM3 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcf1Q9QZM3 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcf1Q9QZM3 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcf1Q9QZM3 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcf1Q9QZM3 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clcf1Q9QZM3 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Clcf1Q9QZM3 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clcf1Q9QZM3 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcf1Q9QZM3 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcf1Q9QZM3 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
Clcf1Q9QZM3 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clcf1Q9QZM3 Gm27459-201ENSMUST00000184860 107 ntBASIC14.44□□□□□ -0.1
Clcf1Q9QZM3 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clcf1Q9QZM3 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.44□□□□□ -0.1
Clcf1Q9QZM3 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcf1Q9QZM3 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcf1Q9QZM3 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcf1Q9QZM3 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Clcf1Q9QZM3 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcf1Q9QZM3 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Clcf1Q9QZM3 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.44□□□□□ -0.1
Clcf1Q9QZM3 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcf1Q9QZM3 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Clcf1Q9QZM3 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcf1Q9QZM3 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcf1Q9QZM3 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcf1Q9QZM3 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Clcf1Q9QZM3 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcf1Q9QZM3 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcf1Q9QZM3 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcf1Q9QZM3 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcf1Q9QZM3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.43□□□□□ -0.1
Clcf1Q9QZM3 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clcf1Q9QZM3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Clcf1Q9QZM3 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcf1Q9QZM3 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Clcf1Q9QZM3 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 190.8 ms