Protein–RNA interactions for Protein: Q9QZ09

Phtf1, Putative homeodomain transcription factor 1, mousemouse

Predictions only

Length 761 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phtf1Q9QZ09 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.48■□□□□ 0.39
Phtf1Q9QZ09 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Phtf1Q9QZ09 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Phtf1Q9QZ09 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Phtf1Q9QZ09 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Phtf1Q9QZ09 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Phtf1Q9QZ09 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Phtf1Q9QZ09 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Phtf1Q9QZ09 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Phtf1Q9QZ09 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Phtf1Q9QZ09 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Phtf1Q9QZ09 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Phtf1Q9QZ09 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Phtf1Q9QZ09 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Phtf1Q9QZ09 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Phtf1Q9QZ09 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC17.47■□□□□ 0.39
Phtf1Q9QZ09 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Phtf1Q9QZ09 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Phtf1Q9QZ09 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Phtf1Q9QZ09 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Phtf1Q9QZ09 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Phtf1Q9QZ09 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Phtf1Q9QZ09 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Phtf1Q9QZ09 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Phtf1Q9QZ09 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Phtf1Q9QZ09 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Phtf1Q9QZ09 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Phtf1Q9QZ09 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Phtf1Q9QZ09 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
Phtf1Q9QZ09 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Phtf1Q9QZ09 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Phtf1Q9QZ09 Gm12497-201ENSMUST00000138778 237 ntBASIC17.46■□□□□ 0.39
Phtf1Q9QZ09 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Phtf1Q9QZ09 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.46■□□□□ 0.39
Phtf1Q9QZ09 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.46■□□□□ 0.39
Phtf1Q9QZ09 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Phtf1Q9QZ09 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Phtf1Q9QZ09 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Phtf1Q9QZ09 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Phtf1Q9QZ09 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Phtf1Q9QZ09 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Phtf1Q9QZ09 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.38
Phtf1Q9QZ09 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.45■□□□□ 0.38
Phtf1Q9QZ09 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Phtf1Q9QZ09 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Phtf1Q9QZ09 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Phtf1Q9QZ09 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Phtf1Q9QZ09 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Phtf1Q9QZ09 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.45■□□□□ 0.38
Phtf1Q9QZ09 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.45■□□□□ 0.38
Phtf1Q9QZ09 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.45■□□□□ 0.38
Phtf1Q9QZ09 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.45■□□□□ 0.38
Phtf1Q9QZ09 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.45■□□□□ 0.38
Phtf1Q9QZ09 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.45■□□□□ 0.38
Phtf1Q9QZ09 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.45■□□□□ 0.38
Phtf1Q9QZ09 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.45■□□□□ 0.38
Phtf1Q9QZ09 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.45■□□□□ 0.38
Phtf1Q9QZ09 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.45■□□□□ 0.38
Phtf1Q9QZ09 Gm8825-201ENSMUST00000182565 998 ntBASIC17.45■□□□□ 0.38
Phtf1Q9QZ09 Gm4518-201ENSMUST00000182638 718 ntBASIC17.45■□□□□ 0.38
Phtf1Q9QZ09 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.45■□□□□ 0.38
Phtf1Q9QZ09 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.45■□□□□ 0.38
Phtf1Q9QZ09 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.45■□□□□ 0.38
Phtf1Q9QZ09 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.45■□□□□ 0.38
Phtf1Q9QZ09 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.45■□□□□ 0.38
Phtf1Q9QZ09 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.45■□□□□ 0.38
Phtf1Q9QZ09 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Phtf1Q9QZ09 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Phtf1Q9QZ09 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Phtf1Q9QZ09 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Phtf1Q9QZ09 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Phtf1Q9QZ09 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Phtf1Q9QZ09 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Phtf1Q9QZ09 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Phtf1Q9QZ09 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Phtf1Q9QZ09 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Phtf1Q9QZ09 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.44■□□□□ 0.38
Phtf1Q9QZ09 Gm5864-201ENSMUST00000202263 970 ntBASIC17.44■□□□□ 0.38
Phtf1Q9QZ09 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.44■□□□□ 0.38
Phtf1Q9QZ09 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.44■□□□□ 0.38
Phtf1Q9QZ09 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Phtf1Q9QZ09 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.44■□□□□ 0.38
Phtf1Q9QZ09 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Phtf1Q9QZ09 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Phtf1Q9QZ09 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Phtf1Q9QZ09 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Phtf1Q9QZ09 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Phtf1Q9QZ09 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Phtf1Q9QZ09 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Phtf1Q9QZ09 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Phtf1Q9QZ09 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Phtf1Q9QZ09 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Phtf1Q9QZ09 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
Phtf1Q9QZ09 Gm6257-201ENSMUST00000163864 910 ntBASIC17.43■□□□□ 0.38
Phtf1Q9QZ09 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.43■□□□□ 0.38
Phtf1Q9QZ09 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.43■□□□□ 0.38
Phtf1Q9QZ09 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.43■□□□□ 0.38
Phtf1Q9QZ09 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Phtf1Q9QZ09 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Phtf1Q9QZ09 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms