Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Msh5Q9QUM7 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Msh5Q9QUM7 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Msh5Q9QUM7 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Msh5Q9QUM7 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Msh5Q9QUM7 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Msh5Q9QUM7 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Msh5Q9QUM7 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.34■□□□□ 0.21
Msh5Q9QUM7 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Msh5Q9QUM7 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Msh5Q9QUM7 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Msh5Q9QUM7 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Msh5Q9QUM7 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Msh5Q9QUM7 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Msh5Q9QUM7 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Msh5Q9QUM7 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Msh5Q9QUM7 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Msh5Q9QUM7 Gm10013-201ENSMUST00000106074 672 ntBASIC16.33■□□□□ 0.2
Msh5Q9QUM7 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Msh5Q9QUM7 Speer4f2-201ENSMUST00000166086 1278 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Msh5Q9QUM7 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.33■□□□□ 0.2
Msh5Q9QUM7 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Msh5Q9QUM7 Rnf212-201ENSMUST00000068946 288 ntTSL 5 BASIC16.33■□□□□ 0.2
Msh5Q9QUM7 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Msh5Q9QUM7 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Msh5Q9QUM7 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Msh5Q9QUM7 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Msh5Q9QUM7 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Msh5Q9QUM7 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Msh5Q9QUM7 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Msh5Q9QUM7 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Msh5Q9QUM7 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Msh5Q9QUM7 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.33■□□□□ 0.2
Msh5Q9QUM7 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Msh5Q9QUM7 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Msh5Q9QUM7 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Msh5Q9QUM7 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Msh5Q9QUM7 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Msh5Q9QUM7 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh5Q9QUM7 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh5Q9QUM7 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh5Q9QUM7 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh5Q9QUM7 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Msh5Q9QUM7 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh5Q9QUM7 Gm11336-201ENSMUST00000118168 334 ntBASIC16.32■□□□□ 0.2
Msh5Q9QUM7 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Msh5Q9QUM7 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh5Q9QUM7 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Msh5Q9QUM7 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Msh5Q9QUM7 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Msh5Q9QUM7 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.32■□□□□ 0.2
Msh5Q9QUM7 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.32■□□□□ 0.2
Msh5Q9QUM7 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Msh5Q9QUM7 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Msh5Q9QUM7 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Msh5Q9QUM7 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh5Q9QUM7 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh5Q9QUM7 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh5Q9QUM7 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh5Q9QUM7 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh5Q9QUM7 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh5Q9QUM7 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh5Q9QUM7 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh5Q9QUM7 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh5Q9QUM7 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh5Q9QUM7 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh5Q9QUM7 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Msh5Q9QUM7 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh5Q9QUM7 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Msh5Q9QUM7 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Msh5Q9QUM7 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.31■□□□□ 0.2
Msh5Q9QUM7 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Msh5Q9QUM7 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh5Q9QUM7 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.31■□□□□ 0.2
Msh5Q9QUM7 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh5Q9QUM7 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Msh5Q9QUM7 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Msh5Q9QUM7 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Msh5Q9QUM7 Prob1-201ENSMUST00000097619 3021 ntBASIC16.31■□□□□ 0.2
Msh5Q9QUM7 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC16.31■□□□□ 0.2
Msh5Q9QUM7 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.31■□□□□ 0.2
Msh5Q9QUM7 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.31■□□□□ 0.2
Msh5Q9QUM7 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Msh5Q9QUM7 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Msh5Q9QUM7 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Msh5Q9QUM7 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Msh5Q9QUM7 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh5Q9QUM7 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh5Q9QUM7 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh5Q9QUM7 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh5Q9QUM7 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh5Q9QUM7 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh5Q9QUM7 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh5Q9QUM7 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.31■□□□□ 0.2
Msh5Q9QUM7 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh5Q9QUM7 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh5Q9QUM7 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Msh5Q9QUM7 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Msh5Q9QUM7 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Msh5Q9QUM7 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms