Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ldb3Q9JKS4 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ldb3Q9JKS4 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ldb3Q9JKS4 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Ldb3Q9JKS4 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ldb3Q9JKS4 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ldb3Q9JKS4 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.45□□□□□ -0.1
Ldb3Q9JKS4 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ldb3Q9JKS4 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ldb3Q9JKS4 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ldb3Q9JKS4 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.45□□□□□ -0.1
Ldb3Q9JKS4 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ldb3Q9JKS4 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb3Q9JKS4 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb3Q9JKS4 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb3Q9JKS4 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.44□□□□□ -0.1
Ldb3Q9JKS4 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb3Q9JKS4 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb3Q9JKS4 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb3Q9JKS4 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Ldb3Q9JKS4 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.44□□□□□ -0.1
Ldb3Q9JKS4 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.44□□□□□ -0.1
Ldb3Q9JKS4 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb3Q9JKS4 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ldb3Q9JKS4 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.44□□□□□ -0.1
Ldb3Q9JKS4 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb3Q9JKS4 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb3Q9JKS4 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb3Q9JKS4 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb3Q9JKS4 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb3Q9JKS4 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.44□□□□□ -0.1
Ldb3Q9JKS4 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb3Q9JKS4 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb3Q9JKS4 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb3Q9JKS4 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb3Q9JKS4 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb3Q9JKS4 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Ldb3Q9JKS4 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb3Q9JKS4 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb3Q9JKS4 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb3Q9JKS4 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb3Q9JKS4 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb3Q9JKS4 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ldb3Q9JKS4 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb3Q9JKS4 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb3Q9JKS4 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb3Q9JKS4 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ldb3Q9JKS4 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb3Q9JKS4 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb3Q9JKS4 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb3Q9JKS4 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.43□□□□□ -0.1
Ldb3Q9JKS4 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb3Q9JKS4 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb3Q9JKS4 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.43□□□□□ -0.1
Ldb3Q9JKS4 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.43□□□□□ -0.1
Ldb3Q9JKS4 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ldb3Q9JKS4 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb3Q9JKS4 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb3Q9JKS4 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb3Q9JKS4 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb3Q9JKS4 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb3Q9JKS4 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb3Q9JKS4 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb3Q9JKS4 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb3Q9JKS4 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb3Q9JKS4 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ldb3Q9JKS4 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.42□□□□□ -0.1
Ldb3Q9JKS4 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Ldb3Q9JKS4 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb3Q9JKS4 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb3Q9JKS4 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb3Q9JKS4 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb3Q9JKS4 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb3Q9JKS4 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb3Q9JKS4 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ldb3Q9JKS4 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb3Q9JKS4 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb3Q9JKS4 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.42□□□□□ -0.1
Ldb3Q9JKS4 Gm6257-201ENSMUST00000163864 910 ntBASIC14.42□□□□□ -0.1
Ldb3Q9JKS4 Gm25745-201ENSMUST00000174945 133 ntBASIC14.42□□□□□ -0.1
Ldb3Q9JKS4 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Ldb3Q9JKS4 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb3Q9JKS4 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
Ldb3Q9JKS4 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb3Q9JKS4 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb3Q9JKS4 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC14.42□□□□□ -0.1
Ldb3Q9JKS4 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb3Q9JKS4 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Ldb3Q9JKS4 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb3Q9JKS4 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb3Q9JKS4 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb3Q9JKS4 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.42□□□□□ -0.1
Ldb3Q9JKS4 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb3Q9JKS4 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb3Q9JKS4 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ldb3Q9JKS4 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.42□□□□□ -0.1
Ldb3Q9JKS4 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ldb3Q9JKS4 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ldb3Q9JKS4 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ldb3Q9JKS4 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms