Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Gm25948-201ENSMUST00000175334 112 ntBASIC17.96■□□□□ 0.47
Cacna1fQ9JIS7 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.96■□□□□ 0.47
Cacna1fQ9JIS7 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacna1fQ9JIS7 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacna1fQ9JIS7 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cacna1fQ9JIS7 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacna1fQ9JIS7 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacna1fQ9JIS7 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Cacna1fQ9JIS7 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacna1fQ9JIS7 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cacna1fQ9JIS7 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC17.96■□□□□ 0.47
Cacna1fQ9JIS7 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Cacna1fQ9JIS7 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Cacna1fQ9JIS7 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
Cacna1fQ9JIS7 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacna1fQ9JIS7 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacna1fQ9JIS7 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacna1fQ9JIS7 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacna1fQ9JIS7 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.95■□□□□ 0.46
Cacna1fQ9JIS7 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.95■□□□□ 0.46
Cacna1fQ9JIS7 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacna1fQ9JIS7 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cacna1fQ9JIS7 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.95■□□□□ 0.46
Cacna1fQ9JIS7 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacna1fQ9JIS7 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.95■□□□□ 0.46
Cacna1fQ9JIS7 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacna1fQ9JIS7 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacna1fQ9JIS7 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Cacna1fQ9JIS7 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacna1fQ9JIS7 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacna1fQ9JIS7 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cacna1fQ9JIS7 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Cacna1fQ9JIS7 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacna1fQ9JIS7 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacna1fQ9JIS7 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Cacna1fQ9JIS7 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Cacna1fQ9JIS7 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.95■□□□□ 0.46
Cacna1fQ9JIS7 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacna1fQ9JIS7 Gm28265-201ENSMUST00000188201 2319 ntBASIC17.95■□□□□ 0.46
Cacna1fQ9JIS7 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Cacna1fQ9JIS7 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacna1fQ9JIS7 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacna1fQ9JIS7 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cacna1fQ9JIS7 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1fQ9JIS7 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1fQ9JIS7 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1fQ9JIS7 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.94■□□□□ 0.46
Cacna1fQ9JIS7 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1fQ9JIS7 AC154767.3-201ENSMUST00000225150 1342 ntBASIC17.94■□□□□ 0.46
Cacna1fQ9JIS7 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Cacna1fQ9JIS7 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
Cacna1fQ9JIS7 Wdyhv1-206ENSMUST00000227142 786 ntBASIC17.94■□□□□ 0.46
Cacna1fQ9JIS7 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1fQ9JIS7 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1fQ9JIS7 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1fQ9JIS7 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC17.94■□□□□ 0.46
Cacna1fQ9JIS7 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1fQ9JIS7 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1fQ9JIS7 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cacna1fQ9JIS7 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1fQ9JIS7 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1fQ9JIS7 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.93■□□□□ 0.46
Cacna1fQ9JIS7 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.93■□□□□ 0.46
Cacna1fQ9JIS7 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Cacna1fQ9JIS7 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.93■□□□□ 0.46
Cacna1fQ9JIS7 AC131187.1-201ENSMUST00000224567 809 ntBASIC17.93■□□□□ 0.46
Cacna1fQ9JIS7 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1fQ9JIS7 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1fQ9JIS7 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1fQ9JIS7 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1fQ9JIS7 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1fQ9JIS7 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC17.93■□□□□ 0.46
Cacna1fQ9JIS7 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.93■□□□□ 0.46
Cacna1fQ9JIS7 Nudt18-203ENSMUST00000228768 1578 ntBASIC17.93■□□□□ 0.46
Cacna1fQ9JIS7 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1fQ9JIS7 Gm45774-201ENSMUST00000211992 2665 ntBASIC17.93■□□□□ 0.46
Cacna1fQ9JIS7 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Cacna1fQ9JIS7 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.93■□□□□ 0.46
Cacna1fQ9JIS7 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1fQ9JIS7 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1fQ9JIS7 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1fQ9JIS7 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1fQ9JIS7 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1fQ9JIS7 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1fQ9JIS7 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Cacna1fQ9JIS7 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1fQ9JIS7 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1fQ9JIS7 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1fQ9JIS7 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1fQ9JIS7 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.92■□□□□ 0.46
Cacna1fQ9JIS7 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.92■□□□□ 0.46
Cacna1fQ9JIS7 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1fQ9JIS7 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1fQ9JIS7 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Cacna1fQ9JIS7 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1fQ9JIS7 Gm20553-201ENSMUST00000204205 844 ntBASIC17.92■□□□□ 0.46
Cacna1fQ9JIS7 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1fQ9JIS7 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1fQ9JIS7 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC17.92■□□□□ 0.46
Cacna1fQ9JIS7 Gm10154-201ENSMUST00000084445 354 ntBASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms