Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC17.47■□□□□ 0.39
Copb1Q9JIF7 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Copb1Q9JIF7 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Copb1Q9JIF7 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.47■□□□□ 0.39
Copb1Q9JIF7 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Copb1Q9JIF7 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Copb1Q9JIF7 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.47■□□□□ 0.39
Copb1Q9JIF7 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Copb1Q9JIF7 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Copb1Q9JIF7 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Copb1Q9JIF7 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Copb1Q9JIF7 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Copb1Q9JIF7 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Copb1Q9JIF7 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.46■□□□□ 0.39
Copb1Q9JIF7 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Copb1Q9JIF7 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.46■□□□□ 0.39
Copb1Q9JIF7 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Copb1Q9JIF7 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC17.46■□□□□ 0.39
Copb1Q9JIF7 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Copb1Q9JIF7 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Copb1Q9JIF7 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.46■□□□□ 0.39
Copb1Q9JIF7 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Copb1Q9JIF7 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Copb1Q9JIF7 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Copb1Q9JIF7 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Copb1Q9JIF7 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
Copb1Q9JIF7 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Copb1Q9JIF7 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Copb1Q9JIF7 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Copb1Q9JIF7 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Copb1Q9JIF7 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Copb1Q9JIF7 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Copb1Q9JIF7 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.45■□□□□ 0.38
Copb1Q9JIF7 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Copb1Q9JIF7 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC17.45■□□□□ 0.38
Copb1Q9JIF7 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Copb1Q9JIF7 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.45■□□□□ 0.38
Copb1Q9JIF7 Gm15565-201ENSMUST00000118890 427 ntBASIC17.45■□□□□ 0.38
Copb1Q9JIF7 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Copb1Q9JIF7 Gm10052-201ENSMUST00000168019 960 ntBASIC17.45■□□□□ 0.38
Copb1Q9JIF7 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Copb1Q9JIF7 Gm44430-201ENSMUST00000203376 995 ntBASIC17.45■□□□□ 0.38
Copb1Q9JIF7 Gm7729-201ENSMUST00000050143 801 ntBASIC17.45■□□□□ 0.38
Copb1Q9JIF7 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Copb1Q9JIF7 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Copb1Q9JIF7 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Copb1Q9JIF7 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Copb1Q9JIF7 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC17.45■□□□□ 0.38
Copb1Q9JIF7 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Copb1Q9JIF7 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Copb1Q9JIF7 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Copb1Q9JIF7 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Copb1Q9JIF7 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Copb1Q9JIF7 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Copb1Q9JIF7 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.44■□□□□ 0.38
Copb1Q9JIF7 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Copb1Q9JIF7 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.44■□□□□ 0.38
Copb1Q9JIF7 Gm22697-201ENSMUST00000175194 63 ntBASIC17.44■□□□□ 0.38
Copb1Q9JIF7 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.44■□□□□ 0.38
Copb1Q9JIF7 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC17.44■□□□□ 0.38
Copb1Q9JIF7 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Copb1Q9JIF7 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC17.44■□□□□ 0.38
Copb1Q9JIF7 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.44■□□□□ 0.38
Copb1Q9JIF7 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Copb1Q9JIF7 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Copb1Q9JIF7 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.43■□□□□ 0.38
Copb1Q9JIF7 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Copb1Q9JIF7 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Copb1Q9JIF7 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Copb1Q9JIF7 Gm11355-201ENSMUST00000121120 306 ntBASIC17.43■□□□□ 0.38
Copb1Q9JIF7 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Copb1Q9JIF7 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Copb1Q9JIF7 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Copb1Q9JIF7 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.43■□□□□ 0.38
Copb1Q9JIF7 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.43■□□□□ 0.38
Copb1Q9JIF7 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Copb1Q9JIF7 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Copb1Q9JIF7 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Copb1Q9JIF7 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Copb1Q9JIF7 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Copb1Q9JIF7 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Copb1Q9JIF7 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Copb1Q9JIF7 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Copb1Q9JIF7 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Copb1Q9JIF7 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Copb1Q9JIF7 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Copb1Q9JIF7 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Copb1Q9JIF7 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Copb1Q9JIF7 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Copb1Q9JIF7 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Copb1Q9JIF7 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.42■□□□□ 0.38
Copb1Q9JIF7 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.42■□□□□ 0.38
Copb1Q9JIF7 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Copb1Q9JIF7 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Copb1Q9JIF7 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Copb1Q9JIF7 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Copb1Q9JIF7 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Copb1Q9JIF7 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Copb1Q9JIF7 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Copb1Q9JIF7 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms