Protein–RNA interactions for Protein: Q9JI57

Gtf2ird1, General transcription factor II-I repeat domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird1Q9JI57 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gtf2ird1Q9JI57 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Gtf2ird1Q9JI57 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Gtf2ird1Q9JI57 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gtf2ird1Q9JI57 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Gtf2ird1Q9JI57 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gtf2ird1Q9JI57 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.13■□□□□ 0.33
Gtf2ird1Q9JI57 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Gtf2ird1Q9JI57 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gtf2ird1Q9JI57 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gtf2ird1Q9JI57 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gtf2ird1Q9JI57 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gtf2ird1Q9JI57 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gtf2ird1Q9JI57 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gtf2ird1Q9JI57 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gtf2ird1Q9JI57 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gtf2ird1Q9JI57 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Gtf2ird1Q9JI57 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.12■□□□□ 0.33
Gtf2ird1Q9JI57 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gtf2ird1Q9JI57 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gtf2ird1Q9JI57 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gtf2ird1Q9JI57 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gtf2ird1Q9JI57 AC127349.1-201ENSMUST00000224590 266 ntBASIC17.12■□□□□ 0.33
Gtf2ird1Q9JI57 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gtf2ird1Q9JI57 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gtf2ird1Q9JI57 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gtf2ird1Q9JI57 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
Gtf2ird1Q9JI57 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gtf2ird1Q9JI57 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gtf2ird1Q9JI57 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gtf2ird1Q9JI57 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gtf2ird1Q9JI57 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Gtf2ird1Q9JI57 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.12■□□□□ 0.33
Gtf2ird1Q9JI57 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Gtf2ird1Q9JI57 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.12■□□□□ 0.33
Gtf2ird1Q9JI57 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf2ird1Q9JI57 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf2ird1Q9JI57 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf2ird1Q9JI57 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf2ird1Q9JI57 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf2ird1Q9JI57 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf2ird1Q9JI57 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf2ird1Q9JI57 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf2ird1Q9JI57 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf2ird1Q9JI57 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf2ird1Q9JI57 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf2ird1Q9JI57 Gm12644-201ENSMUST00000119935 606 ntBASIC17.11■□□□□ 0.33
Gtf2ird1Q9JI57 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC17.11■□□□□ 0.33
Gtf2ird1Q9JI57 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.11■□□□□ 0.33
Gtf2ird1Q9JI57 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Gtf2ird1Q9JI57 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf2ird1Q9JI57 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf2ird1Q9JI57 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf2ird1Q9JI57 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf2ird1Q9JI57 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf2ird1Q9JI57 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.11■□□□□ 0.33
Gtf2ird1Q9JI57 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gtf2ird1Q9JI57 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Gtf2ird1Q9JI57 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf2ird1Q9JI57 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Gtf2ird1Q9JI57 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.1■□□□□ 0.33
Gtf2ird1Q9JI57 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Gtf2ird1Q9JI57 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf2ird1Q9JI57 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf2ird1Q9JI57 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf2ird1Q9JI57 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf2ird1Q9JI57 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf2ird1Q9JI57 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf2ird1Q9JI57 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf2ird1Q9JI57 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Gtf2ird1Q9JI57 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf2ird1Q9JI57 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf2ird1Q9JI57 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf2ird1Q9JI57 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Gtf2ird1Q9JI57 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf2ird1Q9JI57 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC17.1■□□□□ 0.33
Gtf2ird1Q9JI57 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Gtf2ird1Q9JI57 Gm27867-201ENSMUST00000184778 125 ntBASIC17.1■□□□□ 0.33
Gtf2ird1Q9JI57 Gm43347-201ENSMUST00000200226 580 ntBASIC17.1■□□□□ 0.33
Gtf2ird1Q9JI57 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC17.1■□□□□ 0.33
Gtf2ird1Q9JI57 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf2ird1Q9JI57 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf2ird1Q9JI57 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf2ird1Q9JI57 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf2ird1Q9JI57 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf2ird1Q9JI57 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf2ird1Q9JI57 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf2ird1Q9JI57 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gtf2ird1Q9JI57 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf2ird1Q9JI57 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Gtf2ird1Q9JI57 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf2ird1Q9JI57 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.09■□□□□ 0.33
Gtf2ird1Q9JI57 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf2ird1Q9JI57 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf2ird1Q9JI57 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Gtf2ird1Q9JI57 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf2ird1Q9JI57 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Gtf2ird1Q9JI57 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf2ird1Q9JI57 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gtf2ird1Q9JI57 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms