Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ube3bQ9ES34 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ube3bQ9ES34 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ube3bQ9ES34 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ube3bQ9ES34 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Ube3bQ9ES34 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Ube3bQ9ES34 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ube3bQ9ES34 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ube3bQ9ES34 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Ube3bQ9ES34 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
Ube3bQ9ES34 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ube3bQ9ES34 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.9■□□□□ 0.62
Ube3bQ9ES34 Gm15358-201ENSMUST00000119249 520 ntBASIC18.9■□□□□ 0.62
Ube3bQ9ES34 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ube3bQ9ES34 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ube3bQ9ES34 Gm19164-201ENSMUST00000210667 640 ntBASIC18.9■□□□□ 0.62
Ube3bQ9ES34 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.9■□□□□ 0.62
Ube3bQ9ES34 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ube3bQ9ES34 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ube3bQ9ES34 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ube3bQ9ES34 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
Ube3bQ9ES34 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ube3bQ9ES34 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ube3bQ9ES34 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ube3bQ9ES34 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Ube3bQ9ES34 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube3bQ9ES34 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube3bQ9ES34 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Ube3bQ9ES34 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube3bQ9ES34 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ube3bQ9ES34 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ube3bQ9ES34 Gm6443-201ENSMUST00000203599 874 ntBASIC18.89■□□□□ 0.61
Ube3bQ9ES34 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube3bQ9ES34 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.89■□□□□ 0.61
Ube3bQ9ES34 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube3bQ9ES34 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube3bQ9ES34 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Ube3bQ9ES34 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube3bQ9ES34 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube3bQ9ES34 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube3bQ9ES34 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.89■□□□□ 0.61
Ube3bQ9ES34 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ube3bQ9ES34 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ube3bQ9ES34 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ube3bQ9ES34 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ube3bQ9ES34 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ube3bQ9ES34 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ube3bQ9ES34 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.88■□□□□ 0.61
Ube3bQ9ES34 AW822252-206ENSMUST00000208904 237 ntBASIC18.88■□□□□ 0.61
Ube3bQ9ES34 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ube3bQ9ES34 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ube3bQ9ES34 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ube3bQ9ES34 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ube3bQ9ES34 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ube3bQ9ES34 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ube3bQ9ES34 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.88■□□□□ 0.61
Ube3bQ9ES34 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ube3bQ9ES34 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Ube3bQ9ES34 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Ube3bQ9ES34 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ube3bQ9ES34 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Ube3bQ9ES34 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ube3bQ9ES34 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ube3bQ9ES34 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.87■□□□□ 0.61
Ube3bQ9ES34 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Ube3bQ9ES34 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ube3bQ9ES34 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ube3bQ9ES34 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ube3bQ9ES34 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ube3bQ9ES34 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ube3bQ9ES34 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ube3bQ9ES34 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ube3bQ9ES34 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ube3bQ9ES34 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ube3bQ9ES34 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ube3bQ9ES34 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ube3bQ9ES34 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ube3bQ9ES34 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ube3bQ9ES34 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ube3bQ9ES34 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ube3bQ9ES34 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC18.86■□□□□ 0.61
Ube3bQ9ES34 Gm1401-201ENSMUST00000122048 772 ntBASIC18.86■□□□□ 0.61
Ube3bQ9ES34 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ube3bQ9ES34 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.86■□□□□ 0.61
Ube3bQ9ES34 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ube3bQ9ES34 Gm15590-201ENSMUST00000078419 552 ntBASIC18.86■□□□□ 0.61
Ube3bQ9ES34 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.86■□□□□ 0.61
Ube3bQ9ES34 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ube3bQ9ES34 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ube3bQ9ES34 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ube3bQ9ES34 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ube3bQ9ES34 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.86■□□□□ 0.61
Ube3bQ9ES34 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.86■□□□□ 0.61
Ube3bQ9ES34 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ube3bQ9ES34 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube3bQ9ES34 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Ube3bQ9ES34 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube3bQ9ES34 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube3bQ9ES34 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ube3bQ9ES34 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms