Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Tubb3Q9ERD7 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Tubb3Q9ERD7 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.84■□□□□ 0.13
Tubb3Q9ERD7 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tubb3Q9ERD7 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Tubb3Q9ERD7 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tubb3Q9ERD7 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tubb3Q9ERD7 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tubb3Q9ERD7 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Tubb3Q9ERD7 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Tubb3Q9ERD7 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Tubb3Q9ERD7 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Tubb3Q9ERD7 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Tubb3Q9ERD7 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Tubb3Q9ERD7 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Tubb3Q9ERD7 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Tubb3Q9ERD7 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Tubb3Q9ERD7 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Tubb3Q9ERD7 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Tubb3Q9ERD7 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.83■□□□□ 0.13
Tubb3Q9ERD7 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Tubb3Q9ERD7 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Tubb3Q9ERD7 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tubb3Q9ERD7 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tubb3Q9ERD7 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tubb3Q9ERD7 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.83■□□□□ 0.12
Tubb3Q9ERD7 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.83■□□□□ 0.12
Tubb3Q9ERD7 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC15.83■□□□□ 0.12
Tubb3Q9ERD7 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Tubb3Q9ERD7 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Tubb3Q9ERD7 Gm17971-201ENSMUST00000190239 806 ntBASIC15.83■□□□□ 0.12
Tubb3Q9ERD7 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.83■□□□□ 0.12
Tubb3Q9ERD7 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tubb3Q9ERD7 Gm18115-201ENSMUST00000221209 621 ntBASIC15.83■□□□□ 0.12
Tubb3Q9ERD7 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tubb3Q9ERD7 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Tubb3Q9ERD7 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tubb3Q9ERD7 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Tubb3Q9ERD7 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Tubb3Q9ERD7 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Tubb3Q9ERD7 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tubb3Q9ERD7 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tubb3Q9ERD7 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tubb3Q9ERD7 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Tubb3Q9ERD7 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Tubb3Q9ERD7 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Tubb3Q9ERD7 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Tubb3Q9ERD7 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Tubb3Q9ERD7 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Tubb3Q9ERD7 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tubb3Q9ERD7 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tubb3Q9ERD7 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tubb3Q9ERD7 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.82■□□□□ 0.12
Tubb3Q9ERD7 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Tubb3Q9ERD7 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.82■□□□□ 0.12
Tubb3Q9ERD7 Gm27357-201ENSMUST00000183754 135 ntBASIC15.82■□□□□ 0.12
Tubb3Q9ERD7 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Tubb3Q9ERD7 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tubb3Q9ERD7 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tubb3Q9ERD7 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tubb3Q9ERD7 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tubb3Q9ERD7 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tubb3Q9ERD7 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tubb3Q9ERD7 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tubb3Q9ERD7 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tubb3Q9ERD7 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tubb3Q9ERD7 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Tubb3Q9ERD7 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tubb3Q9ERD7 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tubb3Q9ERD7 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Tubb3Q9ERD7 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tubb3Q9ERD7 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tubb3Q9ERD7 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tubb3Q9ERD7 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Tubb3Q9ERD7 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Tubb3Q9ERD7 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Tubb3Q9ERD7 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tubb3Q9ERD7 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tubb3Q9ERD7 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tubb3Q9ERD7 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC15.81■□□□□ 0.12
Tubb3Q9ERD7 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tubb3Q9ERD7 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.81■□□□□ 0.12
Tubb3Q9ERD7 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Tubb3Q9ERD7 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.81■□□□□ 0.12
Tubb3Q9ERD7 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Tubb3Q9ERD7 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tubb3Q9ERD7 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.81■□□□□ 0.12
Tubb3Q9ERD7 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tubb3Q9ERD7 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tubb3Q9ERD7 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tubb3Q9ERD7 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tubb3Q9ERD7 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tubb3Q9ERD7 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tubb3Q9ERD7 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tubb3Q9ERD7 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Tubb3Q9ERD7 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tubb3Q9ERD7 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Tubb3Q9ERD7 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Tubb3Q9ERD7 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Tubb3Q9ERD7 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms