Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a3bpQ9EQG9 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a3bpQ9EQG9 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Col4a3bpQ9EQG9 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC18.27■□□□□ 0.52
Col4a3bpQ9EQG9 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a3bpQ9EQG9 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a3bpQ9EQG9 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a3bpQ9EQG9 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a3bpQ9EQG9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a3bpQ9EQG9 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a3bpQ9EQG9 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Col4a3bpQ9EQG9 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.27■□□□□ 0.52
Col4a3bpQ9EQG9 Gm45328-201ENSMUST00000210942 917 ntBASIC18.27■□□□□ 0.52
Col4a3bpQ9EQG9 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a3bpQ9EQG9 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a3bpQ9EQG9 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a3bpQ9EQG9 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Col4a3bpQ9EQG9 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Col4a3bpQ9EQG9 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.51
Col4a3bpQ9EQG9 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
Col4a3bpQ9EQG9 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
Col4a3bpQ9EQG9 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
Col4a3bpQ9EQG9 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Col4a3bpQ9EQG9 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a3bpQ9EQG9 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a3bpQ9EQG9 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a3bpQ9EQG9 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a3bpQ9EQG9 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a3bpQ9EQG9 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a3bpQ9EQG9 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a3bpQ9EQG9 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a3bpQ9EQG9 Gm9103-201ENSMUST00000119371 405 ntBASIC18.26■□□□□ 0.51
Col4a3bpQ9EQG9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a3bpQ9EQG9 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a3bpQ9EQG9 Gm44430-201ENSMUST00000203376 995 ntBASIC18.26■□□□□ 0.51
Col4a3bpQ9EQG9 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Col4a3bpQ9EQG9 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a3bpQ9EQG9 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.26■□□□□ 0.51
Col4a3bpQ9EQG9 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a3bpQ9EQG9 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a3bpQ9EQG9 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a3bpQ9EQG9 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a3bpQ9EQG9 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Col4a3bpQ9EQG9 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a3bpQ9EQG9 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a3bpQ9EQG9 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Col4a3bpQ9EQG9 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a3bpQ9EQG9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Col4a3bpQ9EQG9 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a3bpQ9EQG9 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a3bpQ9EQG9 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a3bpQ9EQG9 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Col4a3bpQ9EQG9 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a3bpQ9EQG9 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a3bpQ9EQG9 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.25■□□□□ 0.51
Col4a3bpQ9EQG9 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a3bpQ9EQG9 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.25■□□□□ 0.51
Col4a3bpQ9EQG9 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a3bpQ9EQG9 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC18.25■□□□□ 0.51
Col4a3bpQ9EQG9 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.25■□□□□ 0.51
Col4a3bpQ9EQG9 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a3bpQ9EQG9 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a3bpQ9EQG9 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a3bpQ9EQG9 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a3bpQ9EQG9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a3bpQ9EQG9 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a3bpQ9EQG9 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a3bpQ9EQG9 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a3bpQ9EQG9 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a3bpQ9EQG9 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC18.25■□□□□ 0.51
Col4a3bpQ9EQG9 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a3bpQ9EQG9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a3bpQ9EQG9 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a3bpQ9EQG9 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col4a3bpQ9EQG9 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col4a3bpQ9EQG9 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Col4a3bpQ9EQG9 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
Col4a3bpQ9EQG9 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col4a3bpQ9EQG9 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC18.24■□□□□ 0.51
Col4a3bpQ9EQG9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col4a3bpQ9EQG9 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col4a3bpQ9EQG9 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col4a3bpQ9EQG9 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Col4a3bpQ9EQG9 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Col4a3bpQ9EQG9 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC18.24■□□□□ 0.51
Col4a3bpQ9EQG9 Gm10052-201ENSMUST00000168019 960 ntBASIC18.24■□□□□ 0.51
Col4a3bpQ9EQG9 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Col4a3bpQ9EQG9 Gm7729-201ENSMUST00000050143 801 ntBASIC18.24■□□□□ 0.51
Col4a3bpQ9EQG9 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Col4a3bpQ9EQG9 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Col4a3bpQ9EQG9 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col4a3bpQ9EQG9 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Col4a3bpQ9EQG9 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col4a3bpQ9EQG9 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Col4a3bpQ9EQG9 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Col4a3bpQ9EQG9 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col4a3bpQ9EQG9 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col4a3bpQ9EQG9 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.23■□□□□ 0.51
Col4a3bpQ9EQG9 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col4a3bpQ9EQG9 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms