Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
U2af1Q9D883 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC20.93■□□□□ 0.94
U2af1Q9D883 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
U2af1Q9D883 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
U2af1Q9D883 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
U2af1Q9D883 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
U2af1Q9D883 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
U2af1Q9D883 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
U2af1Q9D883 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
U2af1Q9D883 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
U2af1Q9D883 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC20.92■□□□□ 0.94
U2af1Q9D883 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
U2af1Q9D883 Gm18622-201ENSMUST00000219361 595 ntBASIC20.92■□□□□ 0.94
U2af1Q9D883 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
U2af1Q9D883 Gm5837-201ENSMUST00000191844 1369 ntBASIC20.92■□□□□ 0.94
U2af1Q9D883 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
U2af1Q9D883 Gm8784-201ENSMUST00000222096 1435 ntBASIC20.92■□□□□ 0.94
U2af1Q9D883 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
U2af1Q9D883 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
U2af1Q9D883 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC20.92■□□□□ 0.94
U2af1Q9D883 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
U2af1Q9D883 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
U2af1Q9D883 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
U2af1Q9D883 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
U2af1Q9D883 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
U2af1Q9D883 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
U2af1Q9D883 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
U2af1Q9D883 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
U2af1Q9D883 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC20.91■□□□□ 0.94
U2af1Q9D883 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
U2af1Q9D883 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC20.91■□□□□ 0.94
U2af1Q9D883 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
U2af1Q9D883 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
U2af1Q9D883 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
U2af1Q9D883 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC20.91■□□□□ 0.94
U2af1Q9D883 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
U2af1Q9D883 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC20.91■□□□□ 0.94
U2af1Q9D883 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC20.91■□□□□ 0.94
U2af1Q9D883 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
U2af1Q9D883 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
U2af1Q9D883 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
U2af1Q9D883 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
U2af1Q9D883 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
U2af1Q9D883 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
U2af1Q9D883 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
U2af1Q9D883 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
U2af1Q9D883 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
U2af1Q9D883 Gm37166-201ENSMUST00000195473 2474 ntBASIC20.9■□□□□ 0.94
U2af1Q9D883 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
U2af1Q9D883 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
U2af1Q9D883 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
U2af1Q9D883 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
U2af1Q9D883 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
U2af1Q9D883 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
U2af1Q9D883 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
U2af1Q9D883 Gm11780-201ENSMUST00000136880 516 ntBASIC20.9■□□□□ 0.94
U2af1Q9D883 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC20.9■□□□□ 0.94
U2af1Q9D883 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC20.9■□□□□ 0.94
U2af1Q9D883 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC20.9■□□□□ 0.94
U2af1Q9D883 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
U2af1Q9D883 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
U2af1Q9D883 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
U2af1Q9D883 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
U2af1Q9D883 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
U2af1Q9D883 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
U2af1Q9D883 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC20.89■□□□□ 0.94
U2af1Q9D883 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
U2af1Q9D883 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
U2af1Q9D883 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC20.89■□□□□ 0.94
U2af1Q9D883 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
U2af1Q9D883 Gm25990-201ENSMUST00000102440 86 ntBASIC20.89■□□□□ 0.93
U2af1Q9D883 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
U2af1Q9D883 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
U2af1Q9D883 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
U2af1Q9D883 AC117588.1-201ENSMUST00000228510 999 ntBASIC20.89■□□□□ 0.93
U2af1Q9D883 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
U2af1Q9D883 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
U2af1Q9D883 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
U2af1Q9D883 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
U2af1Q9D883 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
U2af1Q9D883 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
U2af1Q9D883 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
U2af1Q9D883 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
U2af1Q9D883 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
U2af1Q9D883 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
U2af1Q9D883 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC20.88■□□□□ 0.93
U2af1Q9D883 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
U2af1Q9D883 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
U2af1Q9D883 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
U2af1Q9D883 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
U2af1Q9D883 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
U2af1Q9D883 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC20.88■□□□□ 0.93
U2af1Q9D883 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC20.88■□□□□ 0.93
U2af1Q9D883 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
U2af1Q9D883 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
U2af1Q9D883 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
U2af1Q9D883 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
U2af1Q9D883 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
U2af1Q9D883 Gm18195-201ENSMUST00000207604 706 ntBASIC20.88■□□□□ 0.93
U2af1Q9D883 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms