Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc7Q9D541 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc7Q9D541 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc7Q9D541 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc7Q9D541 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc7Q9D541 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc7Q9D541 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc7Q9D541 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc7Q9D541 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.62■□□□□ 0.57
Ccdc7Q9D541 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc7Q9D541 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc7Q9D541 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc7Q9D541 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc7Q9D541 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC18.62■□□□□ 0.57
Ccdc7Q9D541 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc7Q9D541 BC037039-201ENSMUST00000192003 2205 ntBASIC18.62■□□□□ 0.57
Ccdc7Q9D541 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc7Q9D541 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc7Q9D541 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.62■□□□□ 0.57
Ccdc7Q9D541 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc7Q9D541 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc7Q9D541 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc7Q9D541 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Ccdc7Q9D541 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc7Q9D541 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc7Q9D541 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc7Q9D541 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc7Q9D541 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc7Q9D541 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc7Q9D541 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc7Q9D541 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc7Q9D541 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Ccdc7Q9D541 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc7Q9D541 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC18.61■□□□□ 0.57
Ccdc7Q9D541 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc7Q9D541 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc7Q9D541 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc7Q9D541 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc7Q9D541 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc7Q9D541 Gm15794-201ENSMUST00000120182 631 ntBASIC18.61■□□□□ 0.57
Ccdc7Q9D541 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc7Q9D541 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.61■□□□□ 0.57
Ccdc7Q9D541 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc7Q9D541 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Ccdc7Q9D541 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc7Q9D541 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc7Q9D541 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Ccdc7Q9D541 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc7Q9D541 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc7Q9D541 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc7Q9D541 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Ccdc7Q9D541 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc7Q9D541 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc7Q9D541 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc7Q9D541 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc7Q9D541 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.6■□□□□ 0.57
Ccdc7Q9D541 Gm45212-201ENSMUST00000205831 3403 ntBASIC18.6■□□□□ 0.57
Ccdc7Q9D541 Gm8258-201ENSMUST00000055593 1449 ntBASIC18.6■□□□□ 0.57
Ccdc7Q9D541 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc7Q9D541 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Ccdc7Q9D541 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Ccdc7Q9D541 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Ccdc7Q9D541 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Ccdc7Q9D541 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc7Q9D541 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc7Q9D541 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.6■□□□□ 0.57
Ccdc7Q9D541 Gm11950-201ENSMUST00000121615 838 ntBASIC18.6■□□□□ 0.57
Ccdc7Q9D541 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Ccdc7Q9D541 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc7Q9D541 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc7Q9D541 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Ccdc7Q9D541 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc7Q9D541 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc7Q9D541 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc7Q9D541 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Ccdc7Q9D541 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Ccdc7Q9D541 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC18.6■□□□□ 0.57
Ccdc7Q9D541 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC18.6■□□□□ 0.57
Ccdc7Q9D541 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc7Q9D541 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc7Q9D541 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Ccdc7Q9D541 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc7Q9D541 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc7Q9D541 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Ccdc7Q9D541 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Ccdc7Q9D541 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Ccdc7Q9D541 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc7Q9D541 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc7Q9D541 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc7Q9D541 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC18.59■□□□□ 0.57
Ccdc7Q9D541 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Ccdc7Q9D541 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Ccdc7Q9D541 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc7Q9D541 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc7Q9D541 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Ccdc7Q9D541 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc7Q9D541 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc7Q9D541 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Ccdc7Q9D541 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc7Q9D541 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms