Protein–RNA interactions for Protein: Q9D4V4

Taf1d, TATA box-binding protein-associated factor RNA polymerase I subunit D, mousemouse

Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf1dQ9D4V4 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Taf1dQ9D4V4 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Taf1dQ9D4V4 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Taf1dQ9D4V4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Taf1dQ9D4V4 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Taf1dQ9D4V4 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Taf1dQ9D4V4 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Taf1dQ9D4V4 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Taf1dQ9D4V4 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Taf1dQ9D4V4 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Taf1dQ9D4V4 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Taf1dQ9D4V4 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Taf1dQ9D4V4 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Taf1dQ9D4V4 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Taf1dQ9D4V4 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Taf1dQ9D4V4 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Taf1dQ9D4V4 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Taf1dQ9D4V4 Gm9794-201ENSMUST00000202370 423 ntBASIC18.96■□□□□ 0.63
Taf1dQ9D4V4 AC135669.1-201ENSMUST00000213585 412 ntBASIC18.96■□□□□ 0.63
Taf1dQ9D4V4 CT030684.1-201ENSMUST00000227292 914 ntBASIC18.96■□□□□ 0.63
Taf1dQ9D4V4 Rbfox2-208ENSMUST00000227930 1218 ntBASIC18.96■□□□□ 0.63
Taf1dQ9D4V4 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Taf1dQ9D4V4 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Taf1dQ9D4V4 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Taf1dQ9D4V4 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Taf1dQ9D4V4 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Taf1dQ9D4V4 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Taf1dQ9D4V4 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Taf1dQ9D4V4 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Taf1dQ9D4V4 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Taf1dQ9D4V4 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Taf1dQ9D4V4 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Taf1dQ9D4V4 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Taf1dQ9D4V4 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Taf1dQ9D4V4 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Taf1dQ9D4V4 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Taf1dQ9D4V4 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Taf1dQ9D4V4 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Taf1dQ9D4V4 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Taf1dQ9D4V4 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Taf1dQ9D4V4 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Taf1dQ9D4V4 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC18.95■□□□□ 0.62
Taf1dQ9D4V4 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Taf1dQ9D4V4 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Taf1dQ9D4V4 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Taf1dQ9D4V4 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Taf1dQ9D4V4 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Taf1dQ9D4V4 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Taf1dQ9D4V4 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Taf1dQ9D4V4 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Taf1dQ9D4V4 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Taf1dQ9D4V4 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Taf1dQ9D4V4 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Taf1dQ9D4V4 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Taf1dQ9D4V4 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Taf1dQ9D4V4 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Taf1dQ9D4V4 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Taf1dQ9D4V4 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Taf1dQ9D4V4 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Taf1dQ9D4V4 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Taf1dQ9D4V4 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.94■□□□□ 0.62
Taf1dQ9D4V4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
Taf1dQ9D4V4 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Taf1dQ9D4V4 Gm13453-201ENSMUST00000118708 357 ntBASIC18.94■□□□□ 0.62
Taf1dQ9D4V4 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC18.94■□□□□ 0.62
Taf1dQ9D4V4 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Taf1dQ9D4V4 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Taf1dQ9D4V4 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Taf1dQ9D4V4 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.94■□□□□ 0.62
Taf1dQ9D4V4 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Taf1dQ9D4V4 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.94■□□□□ 0.62
Taf1dQ9D4V4 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Taf1dQ9D4V4 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Taf1dQ9D4V4 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Taf1dQ9D4V4 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Taf1dQ9D4V4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Taf1dQ9D4V4 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.93■□□□□ 0.62
Taf1dQ9D4V4 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Taf1dQ9D4V4 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
Taf1dQ9D4V4 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Taf1dQ9D4V4 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Taf1dQ9D4V4 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.93■□□□□ 0.62
Taf1dQ9D4V4 Gm12490-201ENSMUST00000120255 560 ntBASIC18.93■□□□□ 0.62
Taf1dQ9D4V4 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC18.93■□□□□ 0.62
Taf1dQ9D4V4 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Taf1dQ9D4V4 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Taf1dQ9D4V4 Gm43433-201ENSMUST00000196573 481 ntBASIC18.93■□□□□ 0.62
Taf1dQ9D4V4 Gm6888-201ENSMUST00000221983 706 ntBASIC18.93■□□□□ 0.62
Taf1dQ9D4V4 Gm5184-201ENSMUST00000220417 1702 ntBASIC18.93■□□□□ 0.62
Taf1dQ9D4V4 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Taf1dQ9D4V4 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.93■□□□□ 0.62
Taf1dQ9D4V4 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Taf1dQ9D4V4 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Taf1dQ9D4V4 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Taf1dQ9D4V4 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Taf1dQ9D4V4 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Taf1dQ9D4V4 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Taf1dQ9D4V4 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Taf1dQ9D4V4 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Taf1dQ9D4V4 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms