Protein–RNA interactions for Protein: Q9D4U4

H2al3, H2A histone family member L3, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2al3Q9D4U4 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2al3Q9D4U4 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2al3Q9D4U4 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
H2al3Q9D4U4 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.97□□□□□ -0.33
H2al3Q9D4U4 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
H2al3Q9D4U4 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
H2al3Q9D4U4 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.97□□□□□ -0.33
H2al3Q9D4U4 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.97□□□□□ -0.33
H2al3Q9D4U4 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.97□□□□□ -0.33
H2al3Q9D4U4 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.97□□□□□ -0.33
H2al3Q9D4U4 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2al3Q9D4U4 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2al3Q9D4U4 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
H2al3Q9D4U4 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2al3Q9D4U4 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2al3Q9D4U4 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC12.97□□□□□ -0.33
H2al3Q9D4U4 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2al3Q9D4U4 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2al3Q9D4U4 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
H2al3Q9D4U4 AC153526.5-201ENSMUST00000218661 2147 ntBASIC12.97□□□□□ -0.33
H2al3Q9D4U4 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2al3Q9D4U4 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2al3Q9D4U4 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H2al3Q9D4U4 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
H2al3Q9D4U4 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
H2al3Q9D4U4 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H2al3Q9D4U4 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H2al3Q9D4U4 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H2al3Q9D4U4 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H2al3Q9D4U4 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H2al3Q9D4U4 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H2al3Q9D4U4 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
H2al3Q9D4U4 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
H2al3Q9D4U4 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
H2al3Q9D4U4 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
H2al3Q9D4U4 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
H2al3Q9D4U4 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H2al3Q9D4U4 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H2al3Q9D4U4 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
H2al3Q9D4U4 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
H2al3Q9D4U4 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.96□□□□□ -0.33
H2al3Q9D4U4 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
H2al3Q9D4U4 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
H2al3Q9D4U4 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
H2al3Q9D4U4 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
H2al3Q9D4U4 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
H2al3Q9D4U4 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
H2al3Q9D4U4 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
H2al3Q9D4U4 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.96□□□□□ -0.34
H2al3Q9D4U4 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
H2al3Q9D4U4 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
H2al3Q9D4U4 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
H2al3Q9D4U4 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
H2al3Q9D4U4 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2al3Q9D4U4 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H2al3Q9D4U4 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2al3Q9D4U4 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
H2al3Q9D4U4 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2al3Q9D4U4 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
H2al3Q9D4U4 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC12.95□□□□□ -0.34
H2al3Q9D4U4 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H2al3Q9D4U4 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2al3Q9D4U4 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2al3Q9D4U4 Mir770-201ENSMUST00000103252 94 ntBASIC12.95□□□□□ -0.34
H2al3Q9D4U4 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H2al3Q9D4U4 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.95□□□□□ -0.34
H2al3Q9D4U4 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC12.95□□□□□ -0.34
H2al3Q9D4U4 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2al3Q9D4U4 Gm10231-201ENSMUST00000181584 441 ntBASIC12.95□□□□□ -0.34
H2al3Q9D4U4 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2al3Q9D4U4 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.95□□□□□ -0.34
H2al3Q9D4U4 Gm10175-202ENSMUST00000208752 441 ntBASIC12.95□□□□□ -0.34
H2al3Q9D4U4 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.95□□□□□ -0.34
H2al3Q9D4U4 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.95□□□□□ -0.34
H2al3Q9D4U4 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2al3Q9D4U4 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2al3Q9D4U4 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2al3Q9D4U4 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2al3Q9D4U4 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
H2al3Q9D4U4 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H2al3Q9D4U4 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H2al3Q9D4U4 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.95□□□□□ -0.34
H2al3Q9D4U4 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
H2al3Q9D4U4 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2al3Q9D4U4 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC12.95□□□□□ -0.34
H2al3Q9D4U4 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.94□□□□□ -0.34
H2al3Q9D4U4 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2al3Q9D4U4 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
H2al3Q9D4U4 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2al3Q9D4U4 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2al3Q9D4U4 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2al3Q9D4U4 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
H2al3Q9D4U4 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
H2al3Q9D4U4 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.94□□□□□ -0.34
H2al3Q9D4U4 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2al3Q9D4U4 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2al3Q9D4U4 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.94□□□□□ -0.34
H2al3Q9D4U4 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2al3Q9D4U4 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2al3Q9D4U4 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms