Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stag1Q9D3E6 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Stag1Q9D3E6 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Stag1Q9D3E6 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stag1Q9D3E6 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stag1Q9D3E6 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stag1Q9D3E6 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stag1Q9D3E6 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stag1Q9D3E6 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stag1Q9D3E6 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stag1Q9D3E6 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stag1Q9D3E6 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Stag1Q9D3E6 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stag1Q9D3E6 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Stag1Q9D3E6 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stag1Q9D3E6 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Stag1Q9D3E6 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stag1Q9D3E6 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC18.93■□□□□ 0.62
Stag1Q9D3E6 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC18.93■□□□□ 0.62
Stag1Q9D3E6 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC18.93■□□□□ 0.62
Stag1Q9D3E6 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC18.93■□□□□ 0.62
Stag1Q9D3E6 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.93■□□□□ 0.62
Stag1Q9D3E6 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stag1Q9D3E6 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.93■□□□□ 0.62
Stag1Q9D3E6 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stag1Q9D3E6 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Stag1Q9D3E6 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stag1Q9D3E6 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stag1Q9D3E6 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Stag1Q9D3E6 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stag1Q9D3E6 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Stag1Q9D3E6 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Stag1Q9D3E6 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Stag1Q9D3E6 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Stag1Q9D3E6 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Stag1Q9D3E6 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Stag1Q9D3E6 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Stag1Q9D3E6 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Stag1Q9D3E6 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Stag1Q9D3E6 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Stag1Q9D3E6 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Stag1Q9D3E6 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Stag1Q9D3E6 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Stag1Q9D3E6 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC18.92■□□□□ 0.62
Stag1Q9D3E6 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Stag1Q9D3E6 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Stag1Q9D3E6 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Stag1Q9D3E6 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Stag1Q9D3E6 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Stag1Q9D3E6 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Stag1Q9D3E6 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Stag1Q9D3E6 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Stag1Q9D3E6 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Stag1Q9D3E6 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Stag1Q9D3E6 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Stag1Q9D3E6 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Stag1Q9D3E6 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Stag1Q9D3E6 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Stag1Q9D3E6 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Stag1Q9D3E6 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Stag1Q9D3E6 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Stag1Q9D3E6 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Stag1Q9D3E6 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Stag1Q9D3E6 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Stag1Q9D3E6 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Stag1Q9D3E6 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Stag1Q9D3E6 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Stag1Q9D3E6 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Stag1Q9D3E6 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.91■□□□□ 0.62
Stag1Q9D3E6 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Stag1Q9D3E6 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.91■□□□□ 0.62
Stag1Q9D3E6 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC18.91■□□□□ 0.62
Stag1Q9D3E6 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Stag1Q9D3E6 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Stag1Q9D3E6 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Stag1Q9D3E6 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Stag1Q9D3E6 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Stag1Q9D3E6 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Stag1Q9D3E6 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Stag1Q9D3E6 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Stag1Q9D3E6 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Stag1Q9D3E6 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Stag1Q9D3E6 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Stag1Q9D3E6 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Stag1Q9D3E6 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Stag1Q9D3E6 Gm8344-201ENSMUST00000119813 856 ntBASIC18.9■□□□□ 0.62
Stag1Q9D3E6 Gm25925-201ENSMUST00000158314 306 ntBASIC18.9■□□□□ 0.62
Stag1Q9D3E6 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC18.9■□□□□ 0.62
Stag1Q9D3E6 Gm27702-201ENSMUST00000184512 56 ntBASIC18.9■□□□□ 0.62
Stag1Q9D3E6 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18.9■□□□□ 0.62
Stag1Q9D3E6 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Stag1Q9D3E6 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Stag1Q9D3E6 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC18.9■□□□□ 0.62
Stag1Q9D3E6 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.9■□□□□ 0.62
Stag1Q9D3E6 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.9■□□□□ 0.62
Stag1Q9D3E6 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Stag1Q9D3E6 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Stag1Q9D3E6 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Stag1Q9D3E6 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC18.9■□□□□ 0.62
Stag1Q9D3E6 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms