Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Chaf1bQ9D0N7 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.02■□□□□ -0
Chaf1bQ9D0N7 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Chaf1bQ9D0N7 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Chaf1bQ9D0N7 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Chaf1bQ9D0N7 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chaf1bQ9D0N7 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Chaf1bQ9D0N7 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.02■□□□□ -0
Chaf1bQ9D0N7 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.02■□□□□ -0
Chaf1bQ9D0N7 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.02■□□□□ -0
Chaf1bQ9D0N7 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.02■□□□□ -0
Chaf1bQ9D0N7 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC15.02■□□□□ -0
Chaf1bQ9D0N7 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.02■□□□□ -0
Chaf1bQ9D0N7 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chaf1bQ9D0N7 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chaf1bQ9D0N7 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Chaf1bQ9D0N7 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chaf1bQ9D0N7 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chaf1bQ9D0N7 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Chaf1bQ9D0N7 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chaf1bQ9D0N7 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chaf1bQ9D0N7 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chaf1bQ9D0N7 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Chaf1bQ9D0N7 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chaf1bQ9D0N7 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Chaf1bQ9D0N7 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chaf1bQ9D0N7 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chaf1bQ9D0N7 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Chaf1bQ9D0N7 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Chaf1bQ9D0N7 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.01□□□□□ -0.01
Chaf1bQ9D0N7 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.01□□□□□ -0.01
Chaf1bQ9D0N7 Slc35b2-207ENSMUST00000226086 850 ntBASIC15.01□□□□□ -0.01
Chaf1bQ9D0N7 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.01□□□□□ -0.01
Chaf1bQ9D0N7 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chaf1bQ9D0N7 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chaf1bQ9D0N7 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chaf1bQ9D0N7 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chaf1bQ9D0N7 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.01□□□□□ -0.01
Chaf1bQ9D0N7 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chaf1bQ9D0N7 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chaf1bQ9D0N7 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Chaf1bQ9D0N7 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chaf1bQ9D0N7 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chaf1bQ9D0N7 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chaf1bQ9D0N7 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chaf1bQ9D0N7 Asic1-205ENSMUST00000228185 1818 ntBASIC15.01□□□□□ -0.01
Chaf1bQ9D0N7 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC15.01□□□□□ -0.01
Chaf1bQ9D0N7 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Chaf1bQ9D0N7 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Chaf1bQ9D0N7 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chaf1bQ9D0N7 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15□□□□□ -0.01
Chaf1bQ9D0N7 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chaf1bQ9D0N7 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Chaf1bQ9D0N7 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chaf1bQ9D0N7 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Chaf1bQ9D0N7 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chaf1bQ9D0N7 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15□□□□□ -0.01
Chaf1bQ9D0N7 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chaf1bQ9D0N7 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chaf1bQ9D0N7 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Chaf1bQ9D0N7 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Chaf1bQ9D0N7 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Chaf1bQ9D0N7 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC15□□□□□ -0.01
Chaf1bQ9D0N7 Gm13186-201ENSMUST00000118031 316 ntBASIC15□□□□□ -0.01
Chaf1bQ9D0N7 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC15□□□□□ -0.01
Chaf1bQ9D0N7 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15□□□□□ -0.01
Chaf1bQ9D0N7 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chaf1bQ9D0N7 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15□□□□□ -0.01
Chaf1bQ9D0N7 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Chaf1bQ9D0N7 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chaf1bQ9D0N7 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chaf1bQ9D0N7 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Chaf1bQ9D0N7 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chaf1bQ9D0N7 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Chaf1bQ9D0N7 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Chaf1bQ9D0N7 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chaf1bQ9D0N7 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chaf1bQ9D0N7 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chaf1bQ9D0N7 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chaf1bQ9D0N7 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chaf1bQ9D0N7 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chaf1bQ9D0N7 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Chaf1bQ9D0N7 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chaf1bQ9D0N7 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chaf1bQ9D0N7 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chaf1bQ9D0N7 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chaf1bQ9D0N7 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
Chaf1bQ9D0N7 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chaf1bQ9D0N7 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chaf1bQ9D0N7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chaf1bQ9D0N7 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chaf1bQ9D0N7 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chaf1bQ9D0N7 AC159205.3-201ENSMUST00000224614 874 ntBASIC14.99□□□□□ -0.01
Chaf1bQ9D0N7 Timm23-208ENSMUST00000226683 750 ntBASIC14.99□□□□□ -0.01
Chaf1bQ9D0N7 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.99□□□□□ -0.01
Chaf1bQ9D0N7 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Chaf1bQ9D0N7 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chaf1bQ9D0N7 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chaf1bQ9D0N7 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Chaf1bQ9D0N7 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms