Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.76□□□□□ -0.05
Trim13Q9CYB0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trim13Q9CYB0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.76□□□□□ -0.05
Trim13Q9CYB0 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim13Q9CYB0 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim13Q9CYB0 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trim13Q9CYB0 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trim13Q9CYB0 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Trim13Q9CYB0 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trim13Q9CYB0 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Trim13Q9CYB0 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim13Q9CYB0 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim13Q9CYB0 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim13Q9CYB0 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim13Q9CYB0 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trim13Q9CYB0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.75□□□□□ -0.05
Trim13Q9CYB0 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim13Q9CYB0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim13Q9CYB0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.75□□□□□ -0.05
Trim13Q9CYB0 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.75□□□□□ -0.05
Trim13Q9CYB0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim13Q9CYB0 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim13Q9CYB0 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim13Q9CYB0 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim13Q9CYB0 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim13Q9CYB0 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim13Q9CYB0 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim13Q9CYB0 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim13Q9CYB0 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim13Q9CYB0 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim13Q9CYB0 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trim13Q9CYB0 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trim13Q9CYB0 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim13Q9CYB0 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim13Q9CYB0 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim13Q9CYB0 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.74□□□□□ -0.05
Trim13Q9CYB0 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim13Q9CYB0 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim13Q9CYB0 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trim13Q9CYB0 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim13Q9CYB0 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.74□□□□□ -0.05
Trim13Q9CYB0 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim13Q9CYB0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.74□□□□□ -0.05
Trim13Q9CYB0 Gm13186-201ENSMUST00000118031 316 ntBASIC14.74□□□□□ -0.05
Trim13Q9CYB0 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim13Q9CYB0 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.74□□□□□ -0.05
Trim13Q9CYB0 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trim13Q9CYB0 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim13Q9CYB0 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim13Q9CYB0 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim13Q9CYB0 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim13Q9CYB0 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim13Q9CYB0 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim13Q9CYB0 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim13Q9CYB0 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trim13Q9CYB0 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim13Q9CYB0 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim13Q9CYB0 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim13Q9CYB0 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim13Q9CYB0 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim13Q9CYB0 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim13Q9CYB0 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim13Q9CYB0 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.73□□□□□ -0.05
Trim13Q9CYB0 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim13Q9CYB0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim13Q9CYB0 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim13Q9CYB0 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim13Q9CYB0 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
Trim13Q9CYB0 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim13Q9CYB0 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim13Q9CYB0 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim13Q9CYB0 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim13Q9CYB0 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trim13Q9CYB0 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trim13Q9CYB0 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trim13Q9CYB0 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim13Q9CYB0 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim13Q9CYB0 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim13Q9CYB0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim13Q9CYB0 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC14.72□□□□□ -0.05
Trim13Q9CYB0 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.72□□□□□ -0.05
Trim13Q9CYB0 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.72□□□□□ -0.05
Trim13Q9CYB0 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
Trim13Q9CYB0 Timm23-208ENSMUST00000226683 750 ntBASIC14.72□□□□□ -0.05
Trim13Q9CYB0 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Trim13Q9CYB0 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trim13Q9CYB0 Gm10812-201ENSMUST00000099864 546 ntBASIC14.72□□□□□ -0.05
Trim13Q9CYB0 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim13Q9CYB0 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim13Q9CYB0 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim13Q9CYB0 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trim13Q9CYB0 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trim13Q9CYB0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim13Q9CYB0 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim13Q9CYB0 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trim13Q9CYB0 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Trim13Q9CYB0 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Trim13Q9CYB0 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trim13Q9CYB0 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trim13Q9CYB0 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms