Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nip7Q9CXK8 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nip7Q9CXK8 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nip7Q9CXK8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nip7Q9CXK8 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nip7Q9CXK8 Gm13597-201ENSMUST00000121239 375 ntBASIC19.78■□□□□ 0.76
Nip7Q9CXK8 Gm6257-201ENSMUST00000163864 910 ntBASIC19.78■□□□□ 0.76
Nip7Q9CXK8 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nip7Q9CXK8 Gm17968-201ENSMUST00000194902 784 ntBASIC19.78■□□□□ 0.76
Nip7Q9CXK8 Gm19164-201ENSMUST00000210667 640 ntBASIC19.78■□□□□ 0.76
Nip7Q9CXK8 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nip7Q9CXK8 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nip7Q9CXK8 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Nip7Q9CXK8 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nip7Q9CXK8 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nip7Q9CXK8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nip7Q9CXK8 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC19.77■□□□□ 0.76
Nip7Q9CXK8 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC19.77■□□□□ 0.76
Nip7Q9CXK8 Gm18489-201ENSMUST00000172565 551 ntBASIC19.77■□□□□ 0.76
Nip7Q9CXK8 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nip7Q9CXK8 AC154572.2-201ENSMUST00000225105 997 ntBASIC19.77■□□□□ 0.76
Nip7Q9CXK8 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nip7Q9CXK8 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nip7Q9CXK8 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Nip7Q9CXK8 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nip7Q9CXK8 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Nip7Q9CXK8 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Nip7Q9CXK8 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Nip7Q9CXK8 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC19.76■□□□□ 0.75
Nip7Q9CXK8 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Nip7Q9CXK8 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nip7Q9CXK8 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nip7Q9CXK8 Gm14701-201ENSMUST00000117156 348 ntBASIC19.76■□□□□ 0.75
Nip7Q9CXK8 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nip7Q9CXK8 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC19.76■□□□□ 0.75
Nip7Q9CXK8 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nip7Q9CXK8 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nip7Q9CXK8 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nip7Q9CXK8 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nip7Q9CXK8 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nip7Q9CXK8 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC19.76■□□□□ 0.75
Nip7Q9CXK8 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nip7Q9CXK8 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nip7Q9CXK8 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nip7Q9CXK8 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Nip7Q9CXK8 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nip7Q9CXK8 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
Nip7Q9CXK8 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nip7Q9CXK8 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nip7Q9CXK8 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nip7Q9CXK8 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nip7Q9CXK8 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nip7Q9CXK8 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nip7Q9CXK8 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nip7Q9CXK8 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC19.75■□□□□ 0.75
Nip7Q9CXK8 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC19.75■□□□□ 0.75
Nip7Q9CXK8 AC122024.2-201ENSMUST00000220086 871 ntBASIC19.75■□□□□ 0.75
Nip7Q9CXK8 AC124549.3-201ENSMUST00000225541 367 ntBASIC19.75■□□□□ 0.75
Nip7Q9CXK8 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nip7Q9CXK8 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nip7Q9CXK8 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nip7Q9CXK8 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC19.75■□□□□ 0.75
Nip7Q9CXK8 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nip7Q9CXK8 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nip7Q9CXK8 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nip7Q9CXK8 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nip7Q9CXK8 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nip7Q9CXK8 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nip7Q9CXK8 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nip7Q9CXK8 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nip7Q9CXK8 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Nip7Q9CXK8 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Nip7Q9CXK8 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nip7Q9CXK8 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nip7Q9CXK8 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Nip7Q9CXK8 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Nip7Q9CXK8 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nip7Q9CXK8 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nip7Q9CXK8 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nip7Q9CXK8 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nip7Q9CXK8 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC19.74■□□□□ 0.75
Nip7Q9CXK8 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nip7Q9CXK8 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nip7Q9CXK8 Gm38318-201ENSMUST00000195769 1706 ntBASIC19.73■□□□□ 0.75
Nip7Q9CXK8 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nip7Q9CXK8 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nip7Q9CXK8 Gm15920-201ENSMUST00000118998 402 ntBASIC19.73■□□□□ 0.75
Nip7Q9CXK8 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Nip7Q9CXK8 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC19.73■□□□□ 0.75
Nip7Q9CXK8 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nip7Q9CXK8 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nip7Q9CXK8 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nip7Q9CXK8 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Nip7Q9CXK8 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nip7Q9CXK8 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nip7Q9CXK8 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nip7Q9CXK8 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nip7Q9CXK8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nip7Q9CXK8 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Nip7Q9CXK8 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms