Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Khdc3Q9CWU5 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc3Q9CWU5 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Khdc3Q9CWU5 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
Khdc3Q9CWU5 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc3Q9CWU5 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Khdc3Q9CWU5 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc3Q9CWU5 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc3Q9CWU5 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc3Q9CWU5 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc3Q9CWU5 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.31■□□□□ 0.04
Khdc3Q9CWU5 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc3Q9CWU5 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Khdc3Q9CWU5 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Khdc3Q9CWU5 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.31■□□□□ 0.04
Khdc3Q9CWU5 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc3Q9CWU5 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc3Q9CWU5 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC15.31■□□□□ 0.04
Khdc3Q9CWU5 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc3Q9CWU5 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc3Q9CWU5 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc3Q9CWU5 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc3Q9CWU5 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Khdc3Q9CWU5 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Khdc3Q9CWU5 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Khdc3Q9CWU5 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Khdc3Q9CWU5 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Khdc3Q9CWU5 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Khdc3Q9CWU5 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Khdc3Q9CWU5 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Khdc3Q9CWU5 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Khdc3Q9CWU5 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Khdc3Q9CWU5 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Khdc3Q9CWU5 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Khdc3Q9CWU5 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Khdc3Q9CWU5 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Khdc3Q9CWU5 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Khdc3Q9CWU5 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Khdc3Q9CWU5 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Khdc3Q9CWU5 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Khdc3Q9CWU5 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Khdc3Q9CWU5 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Khdc3Q9CWU5 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Khdc3Q9CWU5 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Khdc3Q9CWU5 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Khdc3Q9CWU5 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Khdc3Q9CWU5 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Khdc3Q9CWU5 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Khdc3Q9CWU5 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Khdc3Q9CWU5 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Khdc3Q9CWU5 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Khdc3Q9CWU5 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.29■□□□□ 0.04
Khdc3Q9CWU5 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Khdc3Q9CWU5 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Khdc3Q9CWU5 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Khdc3Q9CWU5 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Khdc3Q9CWU5 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Khdc3Q9CWU5 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Khdc3Q9CWU5 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Khdc3Q9CWU5 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Khdc3Q9CWU5 Gm45328-201ENSMUST00000210942 917 ntBASIC15.29■□□□□ 0.04
Khdc3Q9CWU5 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.29■□□□□ 0.04
Khdc3Q9CWU5 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Khdc3Q9CWU5 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Khdc3Q9CWU5 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Khdc3Q9CWU5 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Khdc3Q9CWU5 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Khdc3Q9CWU5 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Khdc3Q9CWU5 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Khdc3Q9CWU5 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Khdc3Q9CWU5 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Khdc3Q9CWU5 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Khdc3Q9CWU5 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Khdc3Q9CWU5 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Khdc3Q9CWU5 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.28■□□□□ 0.04
Khdc3Q9CWU5 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Khdc3Q9CWU5 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Khdc3Q9CWU5 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Khdc3Q9CWU5 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Khdc3Q9CWU5 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Khdc3Q9CWU5 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Khdc3Q9CWU5 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Khdc3Q9CWU5 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Khdc3Q9CWU5 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Khdc3Q9CWU5 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Khdc3Q9CWU5 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.28■□□□□ 0.04
Khdc3Q9CWU5 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Khdc3Q9CWU5 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Khdc3Q9CWU5 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Khdc3Q9CWU5 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Khdc3Q9CWU5 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.28■□□□□ 0.04
Khdc3Q9CWU5 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Khdc3Q9CWU5 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Khdc3Q9CWU5 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.28■□□□□ 0.04
Khdc3Q9CWU5 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Khdc3Q9CWU5 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Khdc3Q9CWU5 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Khdc3Q9CWU5 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Khdc3Q9CWU5 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Khdc3Q9CWU5 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms