Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm7Q9CQQ8 Gm7230-201ENSMUST00000173026 815 ntBASIC16.07■□□□□ 0.16
Lsm7Q9CQQ8 Gm43514-201ENSMUST00000198852 424 ntBASIC16.07■□□□□ 0.16
Lsm7Q9CQQ8 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm7Q9CQQ8 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.07■□□□□ 0.16
Lsm7Q9CQQ8 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm7Q9CQQ8 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm7Q9CQQ8 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm7Q9CQQ8 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm7Q9CQQ8 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm7Q9CQQ8 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm7Q9CQQ8 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm7Q9CQQ8 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm7Q9CQQ8 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm7Q9CQQ8 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm7Q9CQQ8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm7Q9CQQ8 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm7Q9CQQ8 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Lsm7Q9CQQ8 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Lsm7Q9CQQ8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm7Q9CQQ8 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm7Q9CQQ8 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Lsm7Q9CQQ8 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Lsm7Q9CQQ8 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC16.06■□□□□ 0.16
Lsm7Q9CQQ8 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm7Q9CQQ8 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.06■□□□□ 0.16
Lsm7Q9CQQ8 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Lsm7Q9CQQ8 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Lsm7Q9CQQ8 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm7Q9CQQ8 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm7Q9CQQ8 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm7Q9CQQ8 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm7Q9CQQ8 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm7Q9CQQ8 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Lsm7Q9CQQ8 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm7Q9CQQ8 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm7Q9CQQ8 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Lsm7Q9CQQ8 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm7Q9CQQ8 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm7Q9CQQ8 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm7Q9CQQ8 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Lsm7Q9CQQ8 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm7Q9CQQ8 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lsm7Q9CQQ8 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm7Q9CQQ8 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm7Q9CQQ8 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm7Q9CQQ8 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Lsm7Q9CQQ8 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm7Q9CQQ8 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.05■□□□□ 0.16
Lsm7Q9CQQ8 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm7Q9CQQ8 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm7Q9CQQ8 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm7Q9CQQ8 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.05■□□□□ 0.16
Lsm7Q9CQQ8 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm7Q9CQQ8 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.05■□□□□ 0.16
Lsm7Q9CQQ8 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.05■□□□□ 0.16
Lsm7Q9CQQ8 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm7Q9CQQ8 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.05■□□□□ 0.16
Lsm7Q9CQQ8 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Lsm7Q9CQQ8 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Lsm7Q9CQQ8 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm7Q9CQQ8 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm7Q9CQQ8 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm7Q9CQQ8 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.05■□□□□ 0.16
Lsm7Q9CQQ8 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Lsm7Q9CQQ8 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm7Q9CQQ8 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm7Q9CQQ8 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lsm7Q9CQQ8 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Lsm7Q9CQQ8 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm7Q9CQQ8 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm7Q9CQQ8 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.04■□□□□ 0.16
Lsm7Q9CQQ8 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm7Q9CQQ8 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Lsm7Q9CQQ8 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm7Q9CQQ8 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm7Q9CQQ8 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm7Q9CQQ8 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Lsm7Q9CQQ8 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.04■□□□□ 0.16
Lsm7Q9CQQ8 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC16.04■□□□□ 0.16
Lsm7Q9CQQ8 Gm6089-201ENSMUST00000197666 938 ntBASIC16.04■□□□□ 0.16
Lsm7Q9CQQ8 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm7Q9CQQ8 Gm18622-201ENSMUST00000219361 595 ntBASIC16.04■□□□□ 0.16
Lsm7Q9CQQ8 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.04■□□□□ 0.16
Lsm7Q9CQQ8 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Lsm7Q9CQQ8 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Lsm7Q9CQQ8 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm7Q9CQQ8 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm7Q9CQQ8 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm7Q9CQQ8 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm7Q9CQQ8 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm7Q9CQQ8 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm7Q9CQQ8 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm7Q9CQQ8 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC16.04■□□□□ 0.16
Lsm7Q9CQQ8 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lsm7Q9CQQ8 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm7Q9CQQ8 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm7Q9CQQ8 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
Lsm7Q9CQQ8 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lsm7Q9CQQ8 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms