Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Krt88Q9CPR6 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Krt88Q9CPR6 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Krt88Q9CPR6 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt88Q9CPR6 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt88Q9CPR6 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt88Q9CPR6 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Krt88Q9CPR6 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt88Q9CPR6 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Krt88Q9CPR6 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Krt88Q9CPR6 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Krt88Q9CPR6 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt88Q9CPR6 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Krt88Q9CPR6 Gm36967-201ENSMUST00000193814 266 ntBASIC14.41□□□□□ -0.1
Krt88Q9CPR6 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.41□□□□□ -0.1
Krt88Q9CPR6 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Krt88Q9CPR6 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt88Q9CPR6 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt88Q9CPR6 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt88Q9CPR6 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.41□□□□□ -0.1
Krt88Q9CPR6 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt88Q9CPR6 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt88Q9CPR6 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Krt88Q9CPR6 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt88Q9CPR6 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt88Q9CPR6 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.41□□□□□ -0.1
Krt88Q9CPR6 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Krt88Q9CPR6 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Krt88Q9CPR6 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt88Q9CPR6 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt88Q9CPR6 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt88Q9CPR6 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.4□□□□□ -0.1
Krt88Q9CPR6 Phf7-203ENSMUST00000226565 1971 ntBASIC14.4□□□□□ -0.1
Krt88Q9CPR6 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt88Q9CPR6 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt88Q9CPR6 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt88Q9CPR6 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.4□□□□□ -0.1
Krt88Q9CPR6 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Krt88Q9CPR6 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.4□□□□□ -0.1
Krt88Q9CPR6 Gm5643-201ENSMUST00000117081 966 ntBASIC14.4□□□□□ -0.1
Krt88Q9CPR6 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt88Q9CPR6 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt88Q9CPR6 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt88Q9CPR6 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt88Q9CPR6 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Krt88Q9CPR6 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt88Q9CPR6 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt88Q9CPR6 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Krt88Q9CPR6 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Krt88Q9CPR6 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt88Q9CPR6 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Krt88Q9CPR6 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt88Q9CPR6 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt88Q9CPR6 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Krt88Q9CPR6 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
Krt88Q9CPR6 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt88Q9CPR6 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Krt88Q9CPR6 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Krt88Q9CPR6 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Krt88Q9CPR6 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt88Q9CPR6 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Krt88Q9CPR6 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt88Q9CPR6 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Krt88Q9CPR6 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Krt88Q9CPR6 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.39□□□□□ -0.11
Krt88Q9CPR6 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Krt88Q9CPR6 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt88Q9CPR6 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Krt88Q9CPR6 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Krt88Q9CPR6 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt88Q9CPR6 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Krt88Q9CPR6 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Krt88Q9CPR6 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt88Q9CPR6 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt88Q9CPR6 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.39□□□□□ -0.11
Krt88Q9CPR6 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Krt88Q9CPR6 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt88Q9CPR6 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14.39□□□□□ -0.11
Krt88Q9CPR6 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt88Q9CPR6 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt88Q9CPR6 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt88Q9CPR6 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt88Q9CPR6 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt88Q9CPR6 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
Krt88Q9CPR6 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Krt88Q9CPR6 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt88Q9CPR6 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt88Q9CPR6 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt88Q9CPR6 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt88Q9CPR6 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt88Q9CPR6 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Krt88Q9CPR6 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt88Q9CPR6 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Krt88Q9CPR6 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt88Q9CPR6 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Krt88Q9CPR6 Gm13168-201ENSMUST00000121771 632 ntBASIC14.38□□□□□ -0.11
Krt88Q9CPR6 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt88Q9CPR6 Gm22240-201ENSMUST00000175225 82 ntBASIC14.38□□□□□ -0.11
Krt88Q9CPR6 Gm44878-201ENSMUST00000205812 1295 ntBASIC14.38□□□□□ -0.11
Krt88Q9CPR6 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms