Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf8Q99PV0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf8Q99PV0 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf8Q99PV0 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf8Q99PV0 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf8Q99PV0 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf8Q99PV0 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf8Q99PV0 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf8Q99PV0 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf8Q99PV0 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Prpf8Q99PV0 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf8Q99PV0 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.04□□□□□ -0.32
Prpf8Q99PV0 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf8Q99PV0 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf8Q99PV0 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf8Q99PV0 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf8Q99PV0 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Prpf8Q99PV0 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Prpf8Q99PV0 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.04□□□□□ -0.32
Prpf8Q99PV0 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.04□□□□□ -0.32
Prpf8Q99PV0 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.04□□□□□ -0.32
Prpf8Q99PV0 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.04□□□□□ -0.32
Prpf8Q99PV0 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.04□□□□□ -0.32
Prpf8Q99PV0 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Prpf8Q99PV0 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Prpf8Q99PV0 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf8Q99PV0 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Prpf8Q99PV0 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC13.03□□□□□ -0.32
Prpf8Q99PV0 Gm45606-201ENSMUST00000209836 2795 ntBASIC13.03□□□□□ -0.32
Prpf8Q99PV0 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf8Q99PV0 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf8Q99PV0 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf8Q99PV0 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf8Q99PV0 Ddx41-204ENSMUST00000224765 2199 ntBASIC13.03□□□□□ -0.32
Prpf8Q99PV0 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf8Q99PV0 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.03□□□□□ -0.32
Prpf8Q99PV0 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf8Q99PV0 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf8Q99PV0 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf8Q99PV0 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf8Q99PV0 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf8Q99PV0 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf8Q99PV0 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Prpf8Q99PV0 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf8Q99PV0 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13.03□□□□□ -0.32
Prpf8Q99PV0 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Prpf8Q99PV0 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf8Q99PV0 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf8Q99PV0 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf8Q99PV0 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf8Q99PV0 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Prpf8Q99PV0 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf8Q99PV0 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf8Q99PV0 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf8Q99PV0 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC13.03□□□□□ -0.32
Prpf8Q99PV0 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf8Q99PV0 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Prpf8Q99PV0 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf8Q99PV0 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Prpf8Q99PV0 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf8Q99PV0 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Prpf8Q99PV0 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Prpf8Q99PV0 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Prpf8Q99PV0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Prpf8Q99PV0 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC13.02□□□□□ -0.32
Prpf8Q99PV0 Gm36967-201ENSMUST00000193814 266 ntBASIC13.02□□□□□ -0.32
Prpf8Q99PV0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Prpf8Q99PV0 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Prpf8Q99PV0 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Prpf8Q99PV0 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Prpf8Q99PV0 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Prpf8Q99PV0 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Prpf8Q99PV0 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Prpf8Q99PV0 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Prpf8Q99PV0 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf8Q99PV0 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf8Q99PV0 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Prpf8Q99PV0 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Prpf8Q99PV0 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf8Q99PV0 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC13.02□□□□□ -0.33
Prpf8Q99PV0 Gm7222-201ENSMUST00000117512 906 ntBASIC13.02□□□□□ -0.33
Prpf8Q99PV0 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.02□□□□□ -0.33
Prpf8Q99PV0 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf8Q99PV0 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf8Q99PV0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC13.02□□□□□ -0.33
Prpf8Q99PV0 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf8Q99PV0 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf8Q99PV0 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf8Q99PV0 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf8Q99PV0 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.02□□□□□ -0.33
Prpf8Q99PV0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf8Q99PV0 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf8Q99PV0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf8Q99PV0 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf8Q99PV0 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Prpf8Q99PV0 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Prpf8Q99PV0 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Prpf8Q99PV0 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC13.01□□□□□ -0.33
Prpf8Q99PV0 Gm2308-201ENSMUST00000166539 1004 ntBASIC13.01□□□□□ -0.33
Prpf8Q99PV0 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms