Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Msh4Q99MT2 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Msh4Q99MT2 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Msh4Q99MT2 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Msh4Q99MT2 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Msh4Q99MT2 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Msh4Q99MT2 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh4Q99MT2 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh4Q99MT2 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh4Q99MT2 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh4Q99MT2 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh4Q99MT2 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh4Q99MT2 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.54■□□□□ 0.08
Msh4Q99MT2 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh4Q99MT2 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Msh4Q99MT2 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Msh4Q99MT2 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh4Q99MT2 Olfr129-201ENSMUST00000122318 993 ntBASIC15.54■□□□□ 0.08
Msh4Q99MT2 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Msh4Q99MT2 Gm27357-201ENSMUST00000183754 135 ntBASIC15.54■□□□□ 0.08
Msh4Q99MT2 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Msh4Q99MT2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.54■□□□□ 0.08
Msh4Q99MT2 AC125350.1-201ENSMUST00000225115 903 ntBASIC15.54■□□□□ 0.08
Msh4Q99MT2 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh4Q99MT2 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh4Q99MT2 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Msh4Q99MT2 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Msh4Q99MT2 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Msh4Q99MT2 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh4Q99MT2 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh4Q99MT2 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.54■□□□□ 0.08
Msh4Q99MT2 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Msh4Q99MT2 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh4Q99MT2 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.53■□□□□ 0.08
Msh4Q99MT2 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.53■□□□□ 0.08
Msh4Q99MT2 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh4Q99MT2 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Msh4Q99MT2 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh4Q99MT2 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Msh4Q99MT2 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh4Q99MT2 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh4Q99MT2 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh4Q99MT2 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Msh4Q99MT2 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Msh4Q99MT2 Gm18669-201ENSMUST00000216049 778 ntBASIC15.53■□□□□ 0.08
Msh4Q99MT2 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Msh4Q99MT2 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh4Q99MT2 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Msh4Q99MT2 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh4Q99MT2 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Msh4Q99MT2 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh4Q99MT2 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh4Q99MT2 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh4Q99MT2 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Msh4Q99MT2 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Msh4Q99MT2 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Msh4Q99MT2 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Msh4Q99MT2 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.52■□□□□ 0.08
Msh4Q99MT2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.52■□□□□ 0.08
Msh4Q99MT2 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.52■□□□□ 0.08
Msh4Q99MT2 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Msh4Q99MT2 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Msh4Q99MT2 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Msh4Q99MT2 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Msh4Q99MT2 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Msh4Q99MT2 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Msh4Q99MT2 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.52■□□□□ 0.07
Msh4Q99MT2 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Msh4Q99MT2 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Msh4Q99MT2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Msh4Q99MT2 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Msh4Q99MT2 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Msh4Q99MT2 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Msh4Q99MT2 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Msh4Q99MT2 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Msh4Q99MT2 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Msh4Q99MT2 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Msh4Q99MT2 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
Msh4Q99MT2 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.51■□□□□ 0.07
Msh4Q99MT2 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Msh4Q99MT2 Gm28033-201ENSMUST00000184224 96 ntBASIC15.51■□□□□ 0.07
Msh4Q99MT2 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Msh4Q99MT2 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Msh4Q99MT2 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Msh4Q99MT2 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Msh4Q99MT2 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Msh4Q99MT2 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Msh4Q99MT2 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Msh4Q99MT2 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Msh4Q99MT2 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Msh4Q99MT2 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Msh4Q99MT2 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.51■□□□□ 0.07
Msh4Q99MT2 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Msh4Q99MT2 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Msh4Q99MT2 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Msh4Q99MT2 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.5■□□□□ 0.07
Msh4Q99MT2 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Msh4Q99MT2 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Msh4Q99MT2 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Msh4Q99MT2 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms