Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tlr3Q99MB1 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Tlr3Q99MB1 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tlr3Q99MB1 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC17.09■□□□□ 0.33
Tlr3Q99MB1 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.09■□□□□ 0.33
Tlr3Q99MB1 Rprl3-201ENSMUST00000157400 290 ntBASIC17.09■□□□□ 0.33
Tlr3Q99MB1 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Tlr3Q99MB1 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.09■□□□□ 0.33
Tlr3Q99MB1 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.09■□□□□ 0.33
Tlr3Q99MB1 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tlr3Q99MB1 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Tlr3Q99MB1 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tlr3Q99MB1 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tlr3Q99MB1 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tlr3Q99MB1 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Tlr3Q99MB1 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Tlr3Q99MB1 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tlr3Q99MB1 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tlr3Q99MB1 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
Tlr3Q99MB1 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tlr3Q99MB1 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
Tlr3Q99MB1 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tlr3Q99MB1 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.08■□□□□ 0.33
Tlr3Q99MB1 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tlr3Q99MB1 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC17.08■□□□□ 0.32
Tlr3Q99MB1 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tlr3Q99MB1 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
Tlr3Q99MB1 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tlr3Q99MB1 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tlr3Q99MB1 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tlr3Q99MB1 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.08■□□□□ 0.32
Tlr3Q99MB1 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.08■□□□□ 0.32
Tlr3Q99MB1 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.08■□□□□ 0.32
Tlr3Q99MB1 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tlr3Q99MB1 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Tlr3Q99MB1 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tlr3Q99MB1 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.08■□□□□ 0.32
Tlr3Q99MB1 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tlr3Q99MB1 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tlr3Q99MB1 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tlr3Q99MB1 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tlr3Q99MB1 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tlr3Q99MB1 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tlr3Q99MB1 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tlr3Q99MB1 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tlr3Q99MB1 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tlr3Q99MB1 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.07■□□□□ 0.32
Tlr3Q99MB1 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.07■□□□□ 0.32
Tlr3Q99MB1 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.07■□□□□ 0.32
Tlr3Q99MB1 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.07■□□□□ 0.32
Tlr3Q99MB1 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tlr3Q99MB1 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tlr3Q99MB1 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tlr3Q99MB1 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tlr3Q99MB1 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tlr3Q99MB1 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tlr3Q99MB1 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tlr3Q99MB1 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC17.07■□□□□ 0.32
Tlr3Q99MB1 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tlr3Q99MB1 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tlr3Q99MB1 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Tlr3Q99MB1 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tlr3Q99MB1 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.06■□□□□ 0.32
Tlr3Q99MB1 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tlr3Q99MB1 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tlr3Q99MB1 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Tlr3Q99MB1 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Tlr3Q99MB1 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Tlr3Q99MB1 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tlr3Q99MB1 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tlr3Q99MB1 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tlr3Q99MB1 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tlr3Q99MB1 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.06■□□□□ 0.32
Tlr3Q99MB1 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.06■□□□□ 0.32
Tlr3Q99MB1 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tlr3Q99MB1 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tlr3Q99MB1 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tlr3Q99MB1 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tlr3Q99MB1 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tlr3Q99MB1 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tlr3Q99MB1 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tlr3Q99MB1 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tlr3Q99MB1 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tlr3Q99MB1 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tlr3Q99MB1 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Tlr3Q99MB1 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Tlr3Q99MB1 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tlr3Q99MB1 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tlr3Q99MB1 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.05■□□□□ 0.32
Tlr3Q99MB1 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.05■□□□□ 0.32
Tlr3Q99MB1 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Tlr3Q99MB1 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tlr3Q99MB1 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.05■□□□□ 0.32
Tlr3Q99MB1 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Tlr3Q99MB1 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tlr3Q99MB1 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC17.05■□□□□ 0.32
Tlr3Q99MB1 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tlr3Q99MB1 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tlr3Q99MB1 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tlr3Q99MB1 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms