Protein–RNA interactions for Protein: Q99M51

Nck1, Cytoplasmic protein NCK1, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1Q99M51 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nck1Q99M51 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nck1Q99M51 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nck1Q99M51 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nck1Q99M51 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Nck1Q99M51 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nck1Q99M51 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nck1Q99M51 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nck1Q99M51 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Nck1Q99M51 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nck1Q99M51 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nck1Q99M51 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nck1Q99M51 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nck1Q99M51 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nck1Q99M51 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nck1Q99M51 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.22■□□□□ 0.03
Nck1Q99M51 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nck1Q99M51 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Nck1Q99M51 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nck1Q99M51 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nck1Q99M51 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nck1Q99M51 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nck1Q99M51 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nck1Q99M51 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nck1Q99M51 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nck1Q99M51 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.22■□□□□ 0.03
Nck1Q99M51 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Nck1Q99M51 Gm3375-201ENSMUST00000203929 796 ntBASIC15.22■□□□□ 0.03
Nck1Q99M51 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nck1Q99M51 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC15.22■□□□□ 0.03
Nck1Q99M51 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nck1Q99M51 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nck1Q99M51 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nck1Q99M51 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Nck1Q99M51 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nck1Q99M51 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nck1Q99M51 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nck1Q99M51 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nck1Q99M51 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nck1Q99M51 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Nck1Q99M51 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nck1Q99M51 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nck1Q99M51 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nck1Q99M51 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nck1Q99M51 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nck1Q99M51 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Nck1Q99M51 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Nck1Q99M51 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nck1Q99M51 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nck1Q99M51 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nck1Q99M51 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.21■□□□□ 0.03
Nck1Q99M51 Gm11539-201ENSMUST00000119837 557 ntBASIC15.21■□□□□ 0.03
Nck1Q99M51 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nck1Q99M51 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Nck1Q99M51 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC15.21■□□□□ 0.03
Nck1Q99M51 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.21■□□□□ 0.03
Nck1Q99M51 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nck1Q99M51 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Nck1Q99M51 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nck1Q99M51 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Nck1Q99M51 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nck1Q99M51 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Nck1Q99M51 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Nck1Q99M51 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Nck1Q99M51 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nck1Q99M51 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nck1Q99M51 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nck1Q99M51 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nck1Q99M51 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nck1Q99M51 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nck1Q99M51 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nck1Q99M51 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nck1Q99M51 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nck1Q99M51 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nck1Q99M51 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.2■□□□□ 0.02
Nck1Q99M51 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nck1Q99M51 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nck1Q99M51 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nck1Q99M51 Gm43353-201ENSMUST00000199224 1295 ntBASIC15.2■□□□□ 0.02
Nck1Q99M51 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nck1Q99M51 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nck1Q99M51 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nck1Q99M51 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.2■□□□□ 0.02
Nck1Q99M51 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nck1Q99M51 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Nck1Q99M51 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nck1Q99M51 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nck1Q99M51 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nck1Q99M51 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nck1Q99M51 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Nck1Q99M51 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Nck1Q99M51 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nck1Q99M51 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.19■□□□□ 0.02
Nck1Q99M51 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Nck1Q99M51 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nck1Q99M51 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Nck1Q99M51 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.19■□□□□ 0.02
Nck1Q99M51 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nck1Q99M51 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Nck1Q99M51 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms