Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Gm6257-201ENSMUST00000163864 910 ntBASIC19.61■□□□□ 0.73
RtcbQ99LF4 Gm43474-201ENSMUST00000196415 774 ntBASIC19.61■□□□□ 0.73
RtcbQ99LF4 AC140397.2-201ENSMUST00000224213 834 ntBASIC19.61■□□□□ 0.73
RtcbQ99LF4 AC131187.1-201ENSMUST00000224567 809 ntBASIC19.61■□□□□ 0.73
RtcbQ99LF4 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RtcbQ99LF4 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
RtcbQ99LF4 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RtcbQ99LF4 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RtcbQ99LF4 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RtcbQ99LF4 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RtcbQ99LF4 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RtcbQ99LF4 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RtcbQ99LF4 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
RtcbQ99LF4 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RtcbQ99LF4 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
RtcbQ99LF4 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RtcbQ99LF4 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
RtcbQ99LF4 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RtcbQ99LF4 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RtcbQ99LF4 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC19.6■□□□□ 0.73
RtcbQ99LF4 Rprl2-201ENSMUST00000157150 290 ntBASIC19.6■□□□□ 0.73
RtcbQ99LF4 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC19.6■□□□□ 0.73
RtcbQ99LF4 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC19.6■□□□□ 0.73
RtcbQ99LF4 Thap2-203ENSMUST00000218989 527 ntBASIC19.6■□□□□ 0.73
RtcbQ99LF4 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
RtcbQ99LF4 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RtcbQ99LF4 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RtcbQ99LF4 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.6■□□□□ 0.73
RtcbQ99LF4 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RtcbQ99LF4 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
RtcbQ99LF4 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RtcbQ99LF4 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
RtcbQ99LF4 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RtcbQ99LF4 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RtcbQ99LF4 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
RtcbQ99LF4 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RtcbQ99LF4 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
RtcbQ99LF4 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RtcbQ99LF4 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC19.59■□□□□ 0.73
RtcbQ99LF4 Gm5628-201ENSMUST00000222318 1049 ntBASIC19.59■□□□□ 0.73
RtcbQ99LF4 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RtcbQ99LF4 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RtcbQ99LF4 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
RtcbQ99LF4 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.59■□□□□ 0.73
RtcbQ99LF4 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.59■□□□□ 0.73
RtcbQ99LF4 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RtcbQ99LF4 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
RtcbQ99LF4 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RtcbQ99LF4 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RtcbQ99LF4 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
RtcbQ99LF4 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC19.58■□□□□ 0.73
RtcbQ99LF4 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RtcbQ99LF4 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC19.58■□□□□ 0.72
RtcbQ99LF4 Gm18889-201ENSMUST00000174284 929 ntBASIC19.58■□□□□ 0.72
RtcbQ99LF4 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC19.58■□□□□ 0.72
RtcbQ99LF4 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
RtcbQ99LF4 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RtcbQ99LF4 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
RtcbQ99LF4 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
RtcbQ99LF4 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RtcbQ99LF4 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RtcbQ99LF4 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RtcbQ99LF4 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RtcbQ99LF4 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RtcbQ99LF4 AC119177.1-201ENSMUST00000227647 1332 ntBASIC19.57■□□□□ 0.72
RtcbQ99LF4 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RtcbQ99LF4 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RtcbQ99LF4 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RtcbQ99LF4 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RtcbQ99LF4 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RtcbQ99LF4 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
RtcbQ99LF4 Gm20553-201ENSMUST00000204205 844 ntBASIC19.57■□□□□ 0.72
RtcbQ99LF4 AC158538.2-201ENSMUST00000225455 906 ntBASIC19.57■□□□□ 0.72
RtcbQ99LF4 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RtcbQ99LF4 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RtcbQ99LF4 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.57■□□□□ 0.72
RtcbQ99LF4 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RtcbQ99LF4 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RtcbQ99LF4 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RtcbQ99LF4 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RtcbQ99LF4 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RtcbQ99LF4 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RtcbQ99LF4 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RtcbQ99LF4 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RtcbQ99LF4 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RtcbQ99LF4 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RtcbQ99LF4 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
RtcbQ99LF4 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.56■□□□□ 0.72
RtcbQ99LF4 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RtcbQ99LF4 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RtcbQ99LF4 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RtcbQ99LF4 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RtcbQ99LF4 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RtcbQ99LF4 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RtcbQ99LF4 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RtcbQ99LF4 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RtcbQ99LF4 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RtcbQ99LF4 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC19.56■□□□□ 0.72
RtcbQ99LF4 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
RtcbQ99LF4 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms